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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019593.1-P Field mustard cytosol 98.93 99.23
CDX86978 Canola cytosol 97.7 98.31
CDY08129 Canola cytosol 84.99 93.28
CDY05930 Canola cytosol 84.69 92.47
AT3G49370.1 Thale cress cytosol 82.39 90.57
CDX87128 Canola cytosol 76.57 86.21
CDY19836 Canola cytosol 76.42 86.03
CDX80445 Canola cytosol 74.89 83.88
CDX88104 Canola cytosol 74.89 83.88
KRH64343 Soybean cytosol 64.01 70.02
KRH53593 Soybean cytosol 64.01 69.78
CDX87112 Canola cytosol 29.4 66.21
Solyc03g082500.2.1 Tomato nucleus 60.49 66.05
VIT_16s0098g01140.t01 Wine grape cytosol 59.42 65.54
PGSC0003DMT400008340 Potato cytosol 59.88 65.38
GSMUA_Achr9P20900_001 Banana cytosol 53.29 64.09
GSMUA_Achr7P05810_001 Banana cytosol 52.99 63.25
CDY27530 Canola cytosol 56.81 62.25
CDY48019 Canola cytosol 56.81 62.25
GSMUA_Achr3P12500_001 Banana cytosol 51.45 62.22
GSMUA_AchrUn_... Banana cytosol 51.0 62.13
GSMUA_Achr2P03380_001 Banana cytosol 51.15 62.08
Zm00001d036416_P001 Maize plasma membrane 57.73 62.01
Os06t0714200-01 Rice plasma membrane 58.65 61.48
KXG20873 Sorghum cytosol 58.81 61.44
GSMUA_Achr1P04170_001 Banana cytosol 51.15 61.4
HORVU7Hr1G091360.1 Barley cytosol 57.73 60.51
TraesCS7A01G384500.1 Wheat cytosol 57.58 60.45
TraesCS7B01G287100.1 Wheat cytosol 57.58 60.45
TraesCS7D01G380900.1 Wheat cytosol 57.58 60.45
HORVU1Hr1G047350.2 Barley cytosol 55.9 58.21
Zm00001d014773_P001 Maize cytosol 49.0 58.08
TraesCS1B01G201900.1 Wheat cytosol 55.9 57.94
TraesCS1D01G176900.1 Wheat cytosol 55.9 57.94
CDY69753 Canola cytosol, plastid 47.32 57.87
TraesCS1A01G178400.1 Wheat cytosol 55.74 57.78
CDY35427 Canola cytosol 49.92 57.5
CDY65651 Canola cytosol 51.45 57.44
KXG38195 Sorghum cytosol 56.36 57.41
CDY22505 Canola cytosol 49.92 57.39
CDY65016 Canola cytosol 51.76 56.9
CDY52824 Canola cytosol 51.61 56.73
CDX79956 Canola cytosol 50.08 56.67
CDY23873 Canola cytosol 49.77 56.23
Zm00001d032473_P001 Maize cytosol 47.01 55.32
CDY47375 Canola cytosol, nucleus, plasma membrane 48.24 54.88
CDX82311 Canola cytosol 49.46 54.56
CDX95464 Canola cytosol, plastid 49.31 54.39
CDX76010 Canola cytosol 47.47 54.39
CDY22990 Canola cytosol 49.46 54.38
CDY18568 Canola cytosol, plastid 49.16 54.04
CDX92303 Canola cytosol 49.16 53.86
CDX77233 Canola cytosol, plastid 48.7 53.81
CDX99267 Canola cytosol 48.85 53.52
CDY16510 Canola cytosol, plastid 48.7 53.36
CDY57585 Canola cytosol, mitochondrion 33.69 53.14
Zm00001d013868_P001 Maize cytosol 42.88 52.83
Os10t0510700-00 Rice plasma membrane 56.66 50.68
CDY06943 Canola cytosol 35.07 49.14
CDY30782 Canola plastid 32.47 40.54
CDY45213 Canola plastid 32.92 40.49
CDY18593 Canola plastid 33.08 40.07
CDX81407 Canola plastid 33.08 39.93
CDX72575 Canola cytosol 32.77 39.56
CDY47052 Canola cytosol 32.47 39.19
CDY38141 Canola cytosol, plastid 34.3 39.02
CDY63401 Canola cytosol, plastid 34.15 38.72
CDY29208 Canola plastid 34.0 38.14
CDY07808 Canola plastid 34.0 38.01
CDY40640 Canola cytosol 12.1 35.27
CDY48773 Canola cytosol 24.5 33.76
CDX92529 Canola cytosol 27.41 33.52
CDY14001 Canola cytosol 27.11 33.4
CDY42266 Canola cytosol 27.26 33.33
CDY44918 Canola cytosol 27.11 33.15
CDY16652 Canola cytosol 23.58 32.7
CDY53966 Canola cytosol 26.49 32.52
CDX95303 Canola cytosol 26.19 32.39
CDY23165 Canola cytosol 26.19 32.39
CDX67695 Canola cytosol 26.49 32.28
CDX72022 Canola cytosol 26.65 32.22
CDX73684 Canola cytosol 26.03 32.2
CDY06098 Canola cytosol 26.65 32.16
CDX97205 Canola cytosol 26.34 32.15
CDX78044 Canola cytosol, nucleus, plasma membrane 25.88 32.01
CDY33817 Canola cytosol 26.34 31.97
CDX81903 Canola cytosol, plastid 26.49 31.86
CDY29049 Canola cytosol 25.73 31.82
CDY21691 Canola cytosol, plastid 26.65 31.81
CDX90631 Canola cytosol 25.73 31.76
CDX79906 Canola cytosol 25.73 31.58
CDY10809 Canola cytosol 25.88 31.47
CDY34489 Canola cytosol 25.73 31.23
CDY45391 Canola cytosol 25.73 30.77
CDY19084 Canola plastid 26.65 30.74
CDX84782 Canola cytosol, plastid 25.73 30.55
CDY23939 Canola cytosol, plastid 25.73 30.55
CDY14793 Canola cytosol 22.82 30.53
CDX73108 Canola cytosol 25.57 30.53
CDY06900 Canola cytosol 24.5 30.13
CDY15391 Canola plastid 26.65 30.0
CDY10803 Canola cytosol 19.75 28.99
CDY26714 Canola cytosol 26.65 28.57
CDY19259 Canola cytosol, plastid 26.49 28.22
CDY71104 Canola cytosol 5.82 27.14
CDY24762 Canola cytosol 7.35 21.24
TraesCS4A01G458300.1 Wheat cytosol 52.99 21.11
CDX94570 Canola cytosol 23.58 20.75
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078EDM9EnsemblPlants:CDY00200
ProteinID:CDY00200ProteinID:CDY00200.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00109735001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24349PANTHER:PTHR24349:SF186InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF47473
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDB9AFSEG:seg::
Description
BnaA06g21010D
Coordinates
chrLK031917:-:95240..98900
Molecular Weight (calculated)
72571.7 Da
IEP (calculated)
8.834
GRAVY (calculated)
-0.310
Length
653 amino acids
Sequence
(BLAST)
001: MGHCYSRNIS TVEDNDGDIP AGAAQLPNHT DNNHRTSIPN SPAASSSSEV NPYTISPFQS PLPAGVAPSP ARTPGRKFKW PFPPPSPAKP IMAALRRRRG
101: TAPQPRDGPI PEESEEVDDH GRGGGSGGGG GERLDKNFGF SKNFEGKYEL GKEVGRGHFG HTCWAKAKKG KIKGQTVAVK IIAKAKMTSA LSIEDVRREV
201: KLLKALSGHR HMVKFYDVFE DAENVFVVME LCEGGELLDR ILARGGRYPE ADAKRILVQI LSATAFFHLQ GVVHRDLKPE NFLFTSKNED AVLKVIDFGL
301: SDFSRFDQRL NDVVGSAYYV APEVLHRNYS TEADIWSIGV ISYILLCGSR PFYGRTESAI FRCVLRANPN FEDLPWPSIS PIAKEFVKRL LNKDHRKRMT
401: AAQALAHPWL RDENPGLLLD FSIYKLVKSY IRASPFRRAA LKSLSKAIPE EELVFLKAQF MLLEPEDGAL YLRNFTTALT RYATDAMIES RLPDILNLMQ
501: PLAHRKLDFE EFCAAAVSVY QLEALEEWEQ IATIAFDDFE REGSRAISVQ ELAEEMSLGP NAHPLLKDWI RSSDGKLSFL GYAKFLHGVT VRSSSSRPIR
601: ILRFRFWQGF LPLPARLSGE FDGKFGGPKG GLGDVSVGAS YKAYLELSFS SAG
Best Arabidopsis Sequence Match ( AT3G49370.1 )
(BLAST)
001: MGHCYSRNIS TVDDDDEIPS ATAQLPHRSH QNHHQTSSSS SIPQSPATSE VNPYNISPFQ SPLPAGVAPS PARTPGRKFK WPFPPPSPAK PIMAALRRRR
101: GTAPHPRDGP IPEDSEAGGS GGGIGERLDK NFGFAKNFEG KYELGREVGR GHFGHTCWAK AKKGKIKGQT VAVKIISKSK MTSALSIEDV RREVKLLKAL
201: SGHSHMVKFY DVFEDSDNVF VVMELCEGGE LLDSILARGG RYPEAEAKRI LVQILSATAF FHLQGVVHRD LKPENFLFTS KNEDAVLKVI DFGLSDYARF
301: DQRLNDVVGS AYYVAPEVLH RSYSTEADIW SIGVISYILL CGSRPFYGRT ESAIFRCVLR ANPNFDDLPW PSISPIAKDF VKRLLNKDHR KRMTAAQALA
401: HPWLRDENPG LLLDFSIYKL VKSYIRASPF RRAALKSLSK AIPEEELVFL KAQFMLLEPE DGGLHLHNFT TALTRYATDA MIESRLPDIL NMMQPLAHKK
501: LDFEEFCAAS VSVYQLEALE EWEQIATVAF EHFESEGSRA ISVQELAEEM SLGPNAYPLL KDWIRSLDGK LNFLGYAKFL HGVTVRSSSS RPMR
Arabidopsis Description
CRK6CDPK-related kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG12]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.