Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78797
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41140.1 CDX78797 AT4G17750.1 18466301
AT2G41140.1 CDY60785 AT4G17750.1 18466301
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000215.1-P Field mustard cytosol 97.89 98.06
CDY35427 Canola cytosol 97.89 98.06
CDX79956 Canola cytosol 94.54 93.07
AT2G41140.1 Thale cress cytosol 94.01 92.71
CDY23873 Canola cytosol 94.19 92.56
CDY47375 Canola cytosol, nucleus, plasma membrane 86.8 85.89
CDX76010 Canola cytosol 85.21 84.91
KRG95088 Soybean cytosol 61.62 84.13
KRH33063 Soybean endoplasmic reticulum, vacuole 48.24 80.35
GSMUA_Achr6P16020_001 Banana cytosol 60.39 79.95
CDY57585 Canola cytosol, mitochondrion 58.1 79.71
Os07t0641200-01 Rice plasma membrane 36.62 79.39
KRH71707 Soybean cytosol 81.16 79.07
Solyc10g078390.1.1 Tomato cytosol 79.4 78.57
PGSC0003DMT400021598 Potato mitochondrion 78.87 78.05
HORVU7Hr1G066710.3 Barley cytosol 23.24 77.19
Os03t0366200-01 Rice cytosol, plasma membrane 38.73 76.12
HORVU6Hr1G016380.1 Barley cytosol 22.89 76.02
VIT_08s0040g01250.t01 Wine grape cytosol, plastid, vacuole 79.23 75.89
CDY06943 Canola cytosol 61.97 75.54
HORVU3Hr1G026700.1 Barley plasma membrane 18.49 75.0
GSMUA_Achr10P... Banana cytosol 75.88 74.83
TraesCS2A01G146200.2 Wheat cytosol 77.11 74.11
EER99788 Sorghum cytosol 77.29 74.03
TraesCS2B01G171600.1 Wheat cytosol 77.11 73.86
TraesCS2D01G150800.1 Wheat cytosol 77.11 73.86
GSMUA_Achr6P23680_001 Banana cytosol 74.3 73.65
GSMUA_Achr3P18430_001 Banana cytosol 69.01 72.73
HORVU5Hr1G097280.1 Barley extracellular, plasma membrane 11.8 71.28
CDY69753 Canola cytosol, plastid 65.85 70.04
EER94810 Sorghum cytosol 72.89 69.93
CDY65651 Canola cytosol 71.48 69.4
CDY52824 Canola cytosol 72.36 69.19
HORVU1Hr1G005350.3 Barley endoplasmic reticulum, plasma membrane 23.42 68.91
CDY65016 Canola cytosol 72.01 68.86
Zm00001d047428_P001 Maize cytosol 72.18 68.56
CDY18568 Canola cytosol, plastid 65.85 62.96
CDX95464 Canola cytosol, plastid 65.49 62.84
CDX92303 Canola cytosol 65.49 62.42
CDX99267 Canola cytosol 65.49 62.42
CDX82311 Canola cytosol 64.79 62.16
Zm00001d022305_P001 Maize cytosol 65.14 62.08
CDY22990 Canola cytosol 64.44 61.62
Zm00001d007029_P001 Maize cytosol 64.61 61.37
Zm00001d029264_P004 Maize cytosol 72.18 61.19
CDX77233 Canola cytosol, plastid 62.32 59.9
CDY16510 Canola cytosol, plastid 62.15 59.23
CDY27530 Canola cytosol 60.04 57.21
CDY48019 Canola cytosol 60.04 57.21
CDY19836 Canola cytosol 57.39 56.21
CDX87128 Canola cytosol 57.22 56.03
CDX88104 Canola cytosol 56.51 55.06
CDX80445 Canola cytosol 56.34 54.89
CDY08129 Canola cytosol 57.04 54.45
CDY05930 Canola cytosol 56.87 54.01
HORVU2Hr1G025890.1 Barley cytosol 72.01 51.12
CDY00200 Canola cytosol 57.39 49.92
CDX86978 Canola cytosol 56.87 49.77
CDX87112 Canola cytosol 23.06 45.17
CDY45213 Canola plastid 42.08 45.01
CDY30782 Canola plastid 41.2 44.74
CDY18593 Canola plastid 41.55 43.78
CDX81407 Canola plastid 41.2 43.25
CDY38141 Canola cytosol, plastid 43.49 43.03
CDY63401 Canola cytosol, plastid 43.49 42.88
CDY29208 Canola plastid 43.66 42.61
CDX72575 Canola cytosol 40.49 42.51
CDY47052 Canola cytosol 40.32 42.33
CDY07808 Canola plastid 43.49 42.29
CDY40640 Canola cytosol 15.49 39.29
CDX92529 Canola cytosol 35.92 38.2
CDY42266 Canola cytosol 35.56 37.83
CDY44918 Canola cytosol 35.39 37.64
CDY14001 Canola cytosol 35.04 37.55
CDY53966 Canola cytosol 35.04 37.41
CDX97205 Canola cytosol 35.21 37.38
CDY48773 Canola cytosol 31.16 37.34
CDX67695 Canola cytosol 34.33 36.38
CDY33817 Canola cytosol 34.15 36.06
CDX72022 Canola cytosol 34.15 35.93
CDY06098 Canola cytosol 34.15 35.86
CDX73684 Canola cytosol 32.92 35.42
CDY14793 Canola cytosol 30.28 35.25
CDX78044 Canola cytosol, nucleus, plasma membrane 32.75 35.23
CDY23165 Canola cytosol 32.75 35.23
CDX95303 Canola cytosol 32.57 35.04
CDY29049 Canola cytosol 32.57 35.04
CDY45391 Canola cytosol 33.63 34.98
CDX79906 Canola cytosol 32.75 34.96
CDY06900 Canola cytosol 32.57 34.84
CDX90631 Canola cytosol 32.39 34.78
CDX73108 Canola cytosol 33.45 34.73
CDX81903 Canola cytosol, plastid 32.92 34.44
CDY21691 Canola cytosol, plastid 33.1 34.37
CDY10809 Canola cytosol 32.39 34.26
CDY34489 Canola cytosol 32.22 34.01
CDY16652 Canola cytosol 28.17 33.97
CDX84782 Canola cytosol, plastid 32.39 33.45
CDY23939 Canola cytosol, plastid 32.39 33.45
CDY19084 Canola plastid 33.27 33.39
CDY15391 Canola plastid 33.27 32.59
CDY71104 Canola cytosol 7.75 31.43
CDY26714 Canola cytosol 32.92 30.71
CDY19259 Canola cytosol, plastid 32.92 30.51
CDY10803 Canola cytosol 20.77 26.52
CDX94570 Canola cytosol 27.82 21.29
CDY24762 Canola cytosol 7.75 19.47
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.5Gene3D:3.30.200.20GO:A0A078G7N9UniProt:A0A078G7N9
EnsemblPlants:CDY22505ProteinID:CDY22505ProteinID:CDY22505.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00019076001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF92InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE80C2SEG:seg:
Description
BnaC03g23150DBnaC03g23150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7N9]
Coordinates
chrLK032132:+:232910..235954
Molecular Weight (calculated)
63455.7 Da
IEP (calculated)
8.917
GRAVY (calculated)
-0.204
Length
568 amino acids
Sequence
(BLAST)
001: MGICHGKPIE QQSKQSTPVS SDEAPAAKSS GFPFYSPSPL PSLFKPSPAS ASSTPLRIFK RPFPPPSPAK HIRAFLARRN GSTNKPNGVT IPEGKEFEIG
101: LDKSFGFSKH FASHYEIDGE VGRGHFGYTC SAKGKKGSLK GQEVAVKVIP KSKMTTAIAI EDVSREVKIL RALTGHKNLV QFYDAFEDDE NVYIVMELCK
201: GGELLDKILQ RGGKYSEEDA KQVMVQILSV VAYCHLQGVV HRDLKPENFL FSTKDETSPL KAIDFGLSDY VKPDERLNDI VGSAYYVAPE VLHRTYGTEA
301: DMWSIGVIAY ILLCGSRPFW ARTESGIFRA VLKSVPNFEE APWPSLSLDA VDFVKRLLNK DYRKRLTAAQ ALCHPWLVGS HELKIPCDMI IYKLLKVYIM
401: STSLRKSALA ALAKTLTVPQ LAYLREQFTL LGPSKNGYIS MQNYKTAILK SATDAMKDSR VIDFVHMISC LQYKKLDFEE FCASALSVYQ MEAMETWEQH
501: ARRAYELFEK DGNRPIMIEE LASELGLGPS VPVHVVLQDW IRHSDGKLSF LGFVRLLHGV SSRTLHKA
Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)
001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA
Arabidopsis Description
CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.