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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78797
CDY60785

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G41140.1 CDX78797 AT4G17750.1 18466301
AT2G41140.1 CDY60785 AT4G17750.1 18466301
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57585 Canola cytosol, mitochondrion 79.4 89.37
Bra016950.1-P Field mustard cytosol 92.27 87.4
HORVU7Hr1G066710.3 Barley cytosol 24.25 66.08
HORVU6Hr1G016380.1 Barley cytosol 23.82 64.91
KRG95088 Soybean cytosol 57.73 64.66
HORVU5Hr1G097280.1 Barley extracellular, plasma membrane 12.88 63.83
HORVU3Hr1G026700.1 Barley plasma membrane 18.88 62.86
CDY35427 Canola cytosol 75.75 62.26
CDY22505 Canola cytosol 75.54 61.97
AT2G41140.1 Thale cress cytosol 76.39 61.81
GSMUA_Achr6P16020_001 Banana cytosol 56.65 61.54
CDX79956 Canola cytosol 75.97 61.35
CDY23873 Canola cytosol 75.97 61.25
KRH33063 Soybean endoplasmic reticulum, vacuole 44.64 61.0
CDY47375 Canola cytosol, nucleus, plasma membrane 72.1 58.54
CDX76010 Canola cytosol 70.6 57.72
Os07t0641200-01 Rice plasma membrane 32.19 57.25
Os03t0366200-01 Rice cytosol, plasma membrane 35.41 57.09
HORVU1Hr1G005350.3 Barley endoplasmic reticulum, plasma membrane 23.39 56.48
KRH71707 Soybean cytosol 68.03 54.37
PGSC0003DMT400021598 Potato mitochondrion 66.74 54.18
Solyc10g078390.1.1 Tomato cytosol 66.74 54.18
GSMUA_Achr3P18430_001 Banana cytosol 62.66 54.17
VIT_08s0040g01250.t01 Wine grape cytosol, plastid, vacuole 66.95 52.61
GSMUA_Achr10P... Banana cytosol 63.95 51.74
GSMUA_Achr6P23680_001 Banana cytosol 63.3 51.48
TraesCS2A01G146200.2 Wheat cytosol 64.16 50.59
TraesCS2B01G171600.1 Wheat cytosol 64.16 50.42
TraesCS2D01G150800.1 Wheat cytosol 64.16 50.42
EER99788 Sorghum cytosol 63.95 50.25
CDY69753 Canola cytosol, plastid 56.44 49.25
EER94810 Sorghum cytosol 61.37 48.31
Zm00001d047428_P001 Maize cytosol 61.37 47.83
CDY65651 Canola cytosol 59.23 47.18
CDY52824 Canola cytosol 59.44 46.63
CDY65016 Canola cytosol 59.44 46.63
CDY18568 Canola cytosol, plastid 57.08 44.78
CDX95464 Canola cytosol, plastid 56.65 44.59
CDX92303 Canola cytosol 56.87 44.46
Zm00001d007029_P001 Maize cytosol 56.87 44.31
CDX99267 Canola cytosol 56.44 44.13
Zm00001d022305_P001 Maize cytosol 56.44 44.13
CDY22990 Canola cytosol 55.58 43.6
CDX82311 Canola cytosol 55.36 43.58
Zm00001d029264_P004 Maize cytosol 60.73 42.24
CDX77233 Canola cytosol, plastid 53.0 41.79
CDY16510 Canola cytosol, plastid 52.79 41.28
CDY27530 Canola cytosol 52.36 40.94
CDY48019 Canola cytosol 52.36 40.94
CDX87112 Canola cytosol 25.11 40.34
CDY19836 Canola cytosol 49.14 39.48
CDX87128 Canola cytosol 48.93 39.31
CDX88104 Canola cytosol 48.71 38.94
CDX80445 Canola cytosol 48.5 38.77
CDY08129 Canola cytosol 49.14 38.49
CDY05930 Canola cytosol 48.93 38.13
HORVU2Hr1G025890.1 Barley cytosol 62.88 36.62
CDY45213 Canola plastid 40.13 35.22
CDY00200 Canola cytosol 49.14 35.07
CDY30782 Canola plastid 39.27 34.99
CDX86978 Canola cytosol 48.71 34.98
CDY18593 Canola plastid 39.27 33.95
CDX81407 Canola plastid 39.06 33.64
CDX72575 Canola cytosol 38.84 33.46
CDY47052 Canola cytosol 38.84 33.46
CDY38141 Canola cytosol, plastid 40.99 33.28
CDY63401 Canola cytosol, plastid 40.99 33.16
CDY29208 Canola plastid 40.99 32.82
CDY07808 Canola plastid 40.77 32.53
CDY40640 Canola cytosol 14.81 30.8
CDX92529 Canola cytosol 34.98 30.52
CDY42266 Canola cytosol 34.98 30.52
CDX97205 Canola cytosol 34.98 30.47
CDY44918 Canola cytosol 34.76 30.34
CDY53966 Canola cytosol 34.55 30.26
CDY14001 Canola cytosol 34.33 30.19
CDY48773 Canola cytosol 30.04 29.54
CDX67695 Canola cytosol 33.69 29.29
CDY14793 Canola cytosol 30.47 29.1
CDY33817 Canola cytosol 33.48 29.0
CDY45391 Canola cytosol 33.69 28.75
CDX73108 Canola cytosol 33.69 28.7
CDX81903 Canola cytosol, plastid 33.05 28.36
CDY21691 Canola cytosol, plastid 33.26 28.34
CDY06098 Canola cytosol 32.83 28.28
CDY23165 Canola cytosol 31.97 28.22
CDY29049 Canola cytosol 31.97 28.22
CDY10809 Canola cytosol 32.4 28.12
CDX73684 Canola cytosol 31.76 28.03
CDX95303 Canola cytosol 31.76 28.03
CDX90631 Canola cytosol 31.76 27.98
CDX72022 Canola cytosol 32.4 27.96
CDY34489 Canola cytosol 32.19 27.88
CDY06900 Canola cytosol 31.76 27.87
CDX78044 Canola cytosol, nucleus, plasma membrane 31.55 27.84
CDX79906 Canola cytosol 31.76 27.82
CDY16652 Canola cytosol 28.11 27.81
CDX84782 Canola cytosol, plastid 32.62 27.64
CDY23939 Canola cytosol, plastid 32.62 27.64
CDY19084 Canola plastid 33.05 27.21
CDY15391 Canola plastid 33.05 26.55
CDY26714 Canola cytosol 33.05 25.29
CDY19259 Canola cytosol, plastid 33.05 25.12
CDY10803 Canola cytosol 20.39 21.35
CDY71104 Canola cytosol 6.22 20.71
CDX94570 Canola cytosol 27.47 17.25
CDY24762 Canola cytosol 7.51 15.49
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078F5J3EnsemblPlants:CDY06943
ProteinID:CDY06943ProteinID:CDY06943.1InterPro:EF-hand-dom_pairGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00123247001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PFscan:PS50011PANTHER:PTHR24349PANTHER:PTHR24349:SF92
InterPro:Prot_kinase_domSUPFAM:SSF47473SUPFAM:SSF56112UniParc:UPI0004EE899FSEG:seg:
Description
BnaA04g23720D
Coordinates
chrLK031974:-:326341..328912
Molecular Weight (calculated)
52510.3 Da
IEP (calculated)
7.822
GRAVY (calculated)
-0.236
Length
466 amino acids
Sequence
(BLAST)
001: MGICNGKPIQ RSKESRSQVS AETDETSEVG LNKSFGFSRH FSTHYEIDGQ VGRGDLGYTC SAKGKKGSLK GQEVAVKVIH KAKLTNALMV EDVSREVKIM
101: RALTGHKNLV QFYDAFEDDE NVYIVMEQKI IERGCKYAED DAKHVMVQIL SVVAYCHLQG VVHRDLKPEH FLFSTKDETS PLKAVGVGFS AYVKPDERLN
201: DIVGSSLHVA PEVLHRAYGT ESDMWMVGVM TYVLLSGSRP FWAPTEYELF RAVLKTEPSF EEAPWPSLSP DVVDFVKRLL HKDYRKRLTA AQALCHPWLV
301: GSHEVKIPCD MIIYKLVKVY VMSTSLRKSA LAALAKTLTI QQLAHLREQF TLLEPSKDGY ISMQNFKTAI LKSSTNAMKD SGVLDYVHMI SCLQYKKLDF
401: EEFSTREEGN LKHTDCEWIC ELRLGSSSVP MHAVLQDWIR QSDGKLSFLG FVRLLHGASS QTLQKA
Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)
001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA
Arabidopsis Description
CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.