Factsheet for TraesCS2B01G171600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G322300.1
TraesCS5B01G556200.1
TraesCS5D01G553300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41140.1	TraesCS4A01G322300.1	AT4G17750.1	18466301
AT2G41140.1	TraesCS5B01G556200.1	AT4G17750.1	18466301
AT2G41140.1	TraesCS5D01G553300.1	AT4G17750.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G150800.1	Wheat	cytosol	99.33	99.33
TraesCS2A01G146200.2	Wheat	cytosol	98.82	99.15
EER99788	Sorghum	cytosol	94.1	94.1
GSMUA_Achr6P16020_001	Banana	cytosol	60.54	83.68
KRG95088	Soybean	cytosol	57.0	81.25
GSMUA_Achr10P...	Banana	cytosol	78.75	81.08
GSMUA_Achr6P23680_001	Banana	cytosol	76.22	78.88
Zm00001d022305_P001	Maize	cytosol	78.58	78.19
CDY22505	Canola	cytosol	73.86	77.11
Solyc10g078390.1.1	Tomato	cytosol	74.54	77.0
PGSC0003DMT400021598	Potato	mitochondrion	74.54	77.0
Zm00001d007029_P001	Maize	cytosol	77.57	76.92
Bra000215.1-P	Field mustard	cytosol	73.52	76.9
CDY35427	Canola	cytosol	73.52	76.9
KRH33063	Soybean	endoplasmic reticulum, vacuole	44.18	76.83
GSMUA_Achr3P18430_001	Banana	cytosol	69.65	76.62
AT2G41140.1	Thale cress	cytosol	74.37	76.56
KRH71707	Soybean	cytosol	75.21	76.5
Bra004600.1-P	Field mustard	cytosol	74.37	76.43
AT3G56760.1	Thale cress	cytosol	74.03	76.08
CDX79956	Canola	cytosol	74.03	76.08
CDY23873	Canola	cytosol	73.52	75.43
VIT_08s0040g01250.t01	Wine grape	cytosol, plastid, vacuole	75.38	75.38
Bra014673.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.33	73.57
CDX76010	Canola	cytosol	70.49	73.33
CDY47375	Canola	cytosol, nucleus, plasma membrane	70.83	73.17
Bra016950.1-P	Field mustard	cytosol	56.66	68.29
CDY57585	Canola	cytosol, mitochondrion	47.39	67.87
TraesCS2B01G191800.1	Wheat	cytosol	66.61	65.4
CDY06943	Canola	cytosol	50.42	64.16
HORVU2Hr1G025890.1	Barley	cytosol	85.67	63.5
TraesCS7B01G287100.1	Wheat	cytosol	60.54	57.72
TraesCS1B01G201900.1	Wheat	cytosol	58.85	55.4
TraesCS6B01G111800.1	Wheat	cytosol	39.29	45.6
TraesCS3B01G383800.1	Wheat	cytosol	34.74	38.01
TraesCS1B01G301600.1	Wheat	cytosol	34.4	37.16
TraesCS5B01G474500.1	Wheat	cytosol	33.22	36.82
TraesCS2B01G227000.1	Wheat	cytosol	33.22	36.28
TraesCS5B01G112900.1	Wheat	mitochondrion	32.21	34.73
TraesCS5B01G297700.1	Wheat	mitochondrion	31.7	34.06
TraesCS4B01G030100.1	Wheat	plastid	34.23	33.83
TraesCS7B01G165200.1	Wheat	mitochondrion	31.03	31.89

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF157	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2B01G171600	EnsemblPlants:TraesCS2B01G171600.1	TIGR:cd05117	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:144650256..144654866

Molecular Weight (calculated)

65496.7 Da

IEP (calculated)

9.312

GRAVY (calculated)

-0.255

Length

593 amino acids

Sequence
(BLAST)

001: MGLCHGKPSR IPEPKAEEEP RVASSGARDA AGGVAASPAQ AAAAKPGTPK QPKFPFYLPS PLPASSYKGS PANSSVASTP ARGGFKRPFP PPSPAKHIRA
101: LLARRHGSVK PNEASIPEGG EPELGLDKSF GFSKHFFAKY ELGEEVGRGH FGYTCAAKAK KGEHKGQDVA VKVIPKAKMT TAIAIEDVRR EVRILSSLTG
201: HSNLVQFYDA FEDEDNVYIV MELCKGGELL DKILARGGKY SEEDAKVVML QILSVVSFCH LQGVVHRDLK PENFLFSSKE ENSPLKVIDF GLSDFVKPDE
301: RLNDIVGSAY YVAPEVLHRS YGTEGDMWSI GVIAYILLCG SRPFWARTES GIFRAVLKAE PSFDEAPWPT LSAEAKDFVK RLLNKDYRKR MTASQALSHP
401: WIRDAQQVKI PLDMIIYKLI RAYISSSSLR KSALRALAKT LTANQLFYLK EQFELLGPNK SGFISLQNLK SALVKNSTDA MKDSRVIDFV NTVCTLQYRK
501: LDFEEFAASA ISVYQMEALE TWEQHARRAY ELFDKEGNRP IVIEELASEL GLGPSVPLHV VLQDWIRHAD GKLSFLGFIK LLHGVSSRSI PKA

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.