CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65651	Canola	cytosol	98.13	89.57
CDY52824	Canola	cytosol	95.13	85.52
CDY65016	Canola	cytosol	94.76	85.19
VIT_00s0379g00070.t01	Wine grape	cytosol, plasma membrane	50.75	84.42
AT3G50530.2	Thale cress	plastid	94.94	80.22
Os07t0619800-02	Rice	cytosol, plasma membrane	67.6	79.69
TraesCS2D01G173100.1	Wheat	cytosol	66.85	75.0
Zm00001d000221_P001	Maize	cytosol	15.92	74.56
KRH28502	Soybean	cytosol, mitochondrion	78.09	73.42
KRH57894	Soybean	cytosol, plastid	77.34	71.45
Solyc02g065070.2.1	Tomato	cytosol	78.84	71.24
PGSC0003DMT400001990	Potato	cytosol	78.65	71.19
Solyc02g090510.2.1	Tomato	nucleus	79.78	70.18
KRH76957	Soybean	plastid	79.03	69.87
GSMUA_Achr1P21380_001	Banana	cytosol	78.84	69.36
GSMUA_Achr2P07660_001	Banana	cytosol	77.15	67.87
PGSC0003DMT400026076	Potato	cytosol	80.15	66.77
CDY35427	Canola	cytosol	70.04	65.96
CDY22505	Canola	cytosol	70.04	65.85
EER99712	Sorghum	cytosol	73.97	65.72
CDX79956	Canola	cytosol	70.41	65.16
Zm00001d006885_P002	Maize	cytosol	69.85	64.98
CDY23873	Canola	cytosol	70.04	64.71
TraesCS2B01G191800.1	Wheat	cytosol	72.85	64.4
TraesCS2A01G165800.1	Wheat	cytosol, plastid	72.66	64.34
CDY18568	Canola	cytosol, plastid	70.97	63.8
CDY47375	Canola	cytosol, nucleus, plasma membrane	68.54	63.76
CDX95464	Canola	cytosol, plastid	70.6	63.68
CDX76010	Canola	cytosol	67.79	63.51
CDX92303	Canola	cytosol	70.79	63.42
CDX99267	Canola	cytosol	70.6	63.26
CDX82311	Canola	cytosol	69.66	62.84
CDX77233	Canola	cytosol, plastid	68.91	62.27
CDY22990	Canola	cytosol	69.1	62.12
CDY16510	Canola	cytosol, plastid	69.29	62.08
Zm00001d022166_P001	Maize	cytosol	64.04	59.69
CDY57585	Canola	cytosol, mitochondrion	46.07	59.42
CDY06943	Canola	cytosol	49.25	56.44
CDY27530	Canola	cytosol	61.8	55.37
CDY48019	Canola	cytosol	61.61	55.2
CDY19836	Canola	cytosol	58.05	53.45
CDX87128	Canola	cytosol	57.68	53.1
CDX88104	Canola	cytosol	57.3	52.49
CDY05930	Canola	cytosol	58.05	51.84
CDY08129	Canola	cytosol	57.68	51.76
CDX80445	Canola	cytosol	56.37	51.63
CDX86978	Canola	cytosol	57.87	47.61
CDY00200	Canola	cytosol	57.87	47.32
CDX87112	Canola	cytosol	25.66	47.24
HORVU2Hr1G030520.1	Barley	cytosol	43.07	46.46
CDY45213	Canola	plastid	44.57	44.82
CDY30782	Canola	plastid	43.45	44.36
CDY18593	Canola	plastid	44.01	43.6
CDX81407	Canola	plastid	44.01	43.44
CDY38141	Canola	cytosol, plastid	46.63	43.38
CDX72575	Canola	cytosol	43.63	43.07
CDY47052	Canola	cytosol	43.63	43.07
CDY63401	Canola	cytosol, plastid	46.44	43.06
CDY07808	Canola	plastid	45.32	41.44
CDY29208	Canola	plastid	45.13	41.41
CDY48773	Canola	cytosol	33.71	37.97
CDX92529	Canola	cytosol	37.27	37.27
CDY40640	Canola	cytosol	15.54	37.05
CDY14001	Canola	cytosol	36.7	36.98
CDX67695	Canola	cytosol	36.89	36.75
CDY42266	Canola	cytosol	36.52	36.52
CDY44918	Canola	cytosol	36.52	36.52
CDY14793	Canola	cytosol	33.33	36.48
CDY33817	Canola	cytosol	36.7	36.43
VIT_00s0577g00010.t01	Wine grape	plasma membrane	36.52	36.11
CDY53966	Canola	cytosol	35.77	35.9
CDY06900	Canola	cytosol	35.58	35.78
CDY10809	Canola	cytosol	35.96	35.75
CDX97205	Canola	cytosol	35.77	35.7
CDX79906	Canola	cytosol	35.39	35.53
CDY34489	Canola	cytosol	35.77	35.5
CDX72022	Canola	cytosol	35.77	35.37
CDY06098	Canola	cytosol	35.77	35.3
CDX95303	Canola	cytosol	34.27	34.66
CDY45391	Canola	cytosol	35.39	34.62
CDY29049	Canola	cytosol	34.08	34.47
CDY23165	Canola	cytosol	34.08	34.47
CDX90631	Canola	cytosol	34.08	34.4
CDX73108	Canola	cytosol	35.21	34.37
CDX73684	Canola	cytosol	33.9	34.28
CDY16652	Canola	cytosol	30.15	34.18
CDX84782	Canola	cytosol, plastid	35.21	34.18
CDY23939	Canola	cytosol, plastid	35.21	34.18
CDY19084	Canola	plastid	36.14	34.1
CDX78044	Canola	cytosol, nucleus, plasma membrane	33.71	34.09
CDX81903	Canola	cytosol, plastid	34.64	34.07
CDY21691	Canola	cytosol, plastid	34.83	34.0
CDY15391	Canola	plastid	36.52	33.62
CDY71104	Canola	cytosol	8.8	33.57
CDY26714	Canola	cytosol	34.64	30.38
CDY19259	Canola	cytosol, plastid	34.83	30.34
CDY10803	Canola	cytosol	22.1	26.52
CDY24762	Canola	cytosol	9.36	22.12
CDX94570	Canola	cytosol	29.78	21.43

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	GO:A0A078JQ86	UniProt:A0A078JQ86
EnsemblPlants:CDY69753	ProteinID:CDY69753	ProteinID:CDY69753.1	ncoils:Coil	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00092139001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF115	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDF0A6	SEG:seg

Description

BnaCnng65160DBnaCnng65160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ86]

Coordinates

chrLK040224:-:38..2747

Molecular Weight (calculated)

60126.2 Da

IEP (calculated)

8.751

GRAVY (calculated)

-0.308

Length

534 amino acids

Sequence
(BLAST)

001: MGLCHSKPPS SDRVPAQNSP LPASESIKPP PNGDNEGKKS PFFPFFSPSP AHSFFSKKTP ATSGNSTPKR FFKRPFPPPK YEVGEEVGRG HFGYTCAAKF
101: KKGDSKGLQV AVKVIPKAKM TTAIAIEDVR REVKILRALS GHNNLPHFYD AYEDHDNVYI VMELCEGGEL LDRILSRGGK YTEEDAKTVM IQILNVVAFC
201: HLQGVVHRDL KPENFLYTSK EDTSQLKAID FGLSDYVRPD ERLNDIVGSV YYVAPEVLHR SYSTEADIWS VGVIVYILLC GSRPFWARTE SGIFRAVLKA
301: DPTFDDTPWP LLSSEARDFV KRLLNKDPRR RLTAAQALSH PWIKDSNDAK LPLDILVFKL MRAYLRSSSL RKAALRALSK TLTVDELFYL REQFALLEPS
401: KNGTISLENI KSALMKMATD AMKDSRIPEF LAQLSALQYR RMDFEEFCAA ALSVHQLEAL DRWEQHARCA YELFEKEGNR PIMIDELASE LGLGPSVPVH
501: AVLHDWLRHT DGKLSFLGFV KLLHGVSSRT IKAH

Best Arabidopsis Sequence Match ( AT3G50530.2 )
(BLAST)

001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPGKAL RLYAICKLRF QNLETSICLY ALTIAFADER LNDIVGSAYY VAPEVLHRSY STEADIWSVG VIVYILLCGS RPFWARTESG IFRAVLKADP
401: SFDDPPWPLL SSEARDFVKR LLNKDPRKRL TAAQALSHPW IKDSNDAKVP MDILVFKLMR AYLRSSSLRK AALRALSKTL TVDELFYLRE QFALLEPSKN
501: GTISLENIKS ALMKMATDAM KDSRIPEFLG QLSALQYRRM DFEEFCAAAL SVHQLEALDR WEQHARCAYE LFEKEGNRPI MIDELASELG LGPSVPVHAV
601: LHDWLRHTDG KLSFLGFVKL LHGVSSRTIK AH

Arabidopsis Description

CRKCDPK-related kinase [Source:TAIR;Acc:AT3G50530]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.