Factsheet for TraesCS1D01G176900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G178400.1	Wheat	cytosol	99.05	99.05
TraesCS1B01G201900.1	Wheat	cytosol	98.89	98.89
HORVU1Hr1G047350.2	Barley	cytosol	95.56	96.01
Zm00001d032473_P001	Maize	cytosol	74.92	85.05
KXG38195	Sorghum	cytosol	85.24	83.78
Zm00001d013868_P001	Maize	cytosol	69.84	83.02
Os10t0510700-00	Rice	plasma membrane	87.3	75.34
KRH06401	Soybean	cytosol	49.52	75.18
VIT_15s0048g02840.t01	Wine grape	cytosol	67.62	72.08
GSMUA_Achr1P04170_001	Banana	cytosol	61.43	71.14
KRH47835	Soybean	cytosol	64.76	68.92
VIT_16s0098g01140.t01	Wine grape	cytosol	64.6	68.75
Solyc01g096350.2.1	Tomato	cytosol, nucleus	64.13	68.59
TraesCS7D01G380900.1	Wheat	cytosol	67.46	68.33
Solyc03g082500.2.1	Tomato	nucleus	64.29	67.73
PGSC0003DMT400008340	Potato	cytosol	64.13	67.56
KRH64343	Soybean	cytosol	63.97	67.5
CDY27530	Canola	cytosol	62.86	66.44
AT2G46700.1	Thale cress	cytosol	62.7	66.39
KRH53593	Soybean	cytosol	63.02	66.28
CDY48019	Canola	cytosol	62.7	66.28
Bra039263.1-P	Field mustard	cytosol	62.54	66.11
TraesCS2D01G173100.1	Wheat	cytosol	49.21	65.13
CDX87128	Canola	cytosol	57.62	62.59
Bra036512.1-P	Field mustard	cytosol	57.62	62.59
CDY19836	Canola	cytosol	57.46	62.41
AT5G24430.1	Thale cress	cytosol	58.25	61.78
CDX88104	Canola	cytosol	56.83	61.41
Bra017989.1-P	Field mustard	cytosol	56.98	60.74
AT3G49370.1	Thale cress	cytosol	57.14	60.61
CDX80445	Canola	cytosol	56.03	60.55
Bra009765.1-P	Field mustard	cytosol	54.6	60.46
CDY08129	Canola	cytosol	56.83	60.17
CDY05930	Canola	cytosol	56.67	59.7
TraesCS2D01G150800.1	Wheat	cytosol	55.24	58.68
CDY00200	Canola	cytosol	57.94	55.9
CDX86978	Canola	cytosol	57.3	55.62
Bra019593.1-P	Field mustard	cytosol	57.46	55.61
CDX87112	Canola	cytosol	23.65	51.38
TraesCS2D01G245700.1	Wheat	cytosol	35.4	43.81
TraesCS2D01G207400.1	Wheat	cytosol	30.0	34.81
TraesCS4D01G027600.1	Wheat	plastid	31.43	34.74
TraesCS5D01G475900.1	Wheat	cytosol	29.37	34.64
TraesCS3D01G345500.1	Wheat	cytosol	29.68	34.44
TraesCS1D01G290700.1	Wheat	cytosol	29.68	34.06
TraesCS5D01G305200.1	Wheat	mitochondrion	29.37	33.51
TraesCS7D01G267700.1	Wheat	mitochondrion, plastid	27.78	29.97
TraesCS5D01G119100.2	Wheat	mitochondrion	27.62	29.24

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.5	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF186	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1D01G176900	EnsemblPlants:TraesCS1D01G176900.1	TIGR:cd05117
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:251980847..251985492

Molecular Weight (calculated)

69318.6 Da

IEP (calculated)

8.642

GRAVY (calculated)

-0.345

Length

630 amino acids

Sequence
(BLAST)

001: MGQCYAKNIH ADGGDGGEGG GGTTTISVSA SAAAAVQEEP AGERATGGRR SGRPSPAGTP RSRAGVTPAR TSAAAAGSPW AASPLPEGIA PSPATSASTP
101: RRFFRRPFPP PSPAKHIKAS LVRRLGHRSP AATSAQAPPA KPPQEAPIPE QGAGGGGGEE ELDKSFGYDR HFAVKYELGK EVGRGHFGHT CLARARKGDM
201: RGQVIAVKVI SKAKMTTAIS IEDVRREVKI LKALSGHSNL VKFYDACEDA LNVYIIMELC EGGELLDRIL SRGGRYTEDD AKVIIKQILS VVAFCHLQGV
301: VHRDLKPENF LFSTRDEHSP MKLIDFGLSD FIRPDERLND IVGSAYYVAP EVLHRSYSTE ADMWSVGVIT YILLCGSRPF WARTESGIFR SVLRADPNFD
401: DSPWASISPE AKDFVKRLLN KDYRKRMTAA QALSHPWLRD ECCPVPLDML VFKLVKAHLR STPFKRAALK ALSRAITEDE LIYARAQYNL LQPSSQDGRI
501: CIENFRMALL QNSTDAMKES RTLDILSALE PLAYRRMDFE EFRAATISPY QLEASSMWDE IASTAFECFE QEGNRVITIE ELAQEMNLSS AAYSIVRDWI
601: RPSDGKLSFI GYTKFLHGLT MRSSNARRHH

Best Arabidopsis Sequence Match ( AT2G46700.1 )
(BLAST)

001: MGQCYGKVNQ SKQNGEEEAN TTTYVVSGDG NQIQPLTPVN YGRAKNTPAR SSNPSPWPSP FPHGSASPLP SGVSPSPART STPRRFFRRP FPPPSPAKHI
101: KASLIKRLGV KPKEGPIPEE RGTEPEQSLD KSFGYGKNFG AKYELGKEVG RGHFGHTCSG RGKKGDIKDH PIAVKIISKA KMTTAIAIED VRREVKLLKS
201: LSGHKYLIKY YDACEDANNV YIVMELCDGG ELLDRILARG GKYPEDDAKA IVVQILTVVS FCHLQGVVHR DLKPENFLFT SSREDSDLKL IDFGLSDFIR
301: PDERLNDIVG SAYYVAPEVL HRSYSLEADI WSIGVITYIL LCGSRPFWAR TESGIFRTVL RTEPNYDDVP WPSCSSEGKD FVKRLLNKDY RKRMSAVQAL
401: THPWLRDDSR VIPLDILIYK LVKAYLHATP LRRAALKALA KALTENELVY LRAQFMLLGP NKDGSVSLEN FKTALMQNAT DAMRESRVPE ILHTMESLAY
501: RKMYFEEFCA AAISIHQLEA VDAWEEIATA GFQHFETEGN RVITIEELAR ELNVGASAYG HLRDWVRSSD GKLSYLGFTK FLHGVTLRAA HARPR

Arabidopsis Description

CRK3CDPK-related kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.