Factsheet for PGSC0003DMT400009177

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g083850.2.1	Tomato	plastid	98.58	97.54
PGSC0003DMT400058126	Potato	plastid	87.59	86.97
KRH08079	Soybean	plastid	77.66	82.95
CDY71104	Canola	cytosol	20.21	81.43
KRH69782	Soybean	plastid	76.42	81.32
VIT_04s0023g03420.t01	Wine grape	plastid	79.79	80.65
GSMUA_Achr2P00480_001	Banana	cytosol	42.02	80.34
KRH76656	Soybean	plastid	79.26	79.54
TraesCS2D01G245700.1	Wheat	cytosol	71.63	79.37
KRH28800	Soybean	plastid	79.08	79.36
Bra012058.1-P	Field mustard	plastid	74.65	79.28
CDY45213	Canola	plastid	74.65	79.28
Os07t0409900-01	Rice	plasma membrane	71.81	79.1
TraesCS2A01G239900.1	Wheat	cytosol	71.28	78.98
GSMUA_Achr1P08900_001	Banana	plastid	75.0	78.92
AT5G66210.1	Thale cress	plastid	73.05	78.78
Zm00001d005164_P001	Maize	cytosol	71.28	78.52
CDY18593	Canola	plastid	74.82	78.29
Bra037181.1-P	Field mustard	plastid	74.65	78.25
EER98402	Sorghum	cytosol	71.28	78.21
CDY30782	Canola	plastid	72.16	77.82
HORVU4Hr1G078080.2	Barley	cytosol	36.52	77.74
CDX81407	Canola	plastid	73.94	77.08
TraesCS6B01G111800.1	Wheat	cytosol	69.5	76.71
TraesCS6A01G089400.2	Wheat	cytosol	69.5	76.71
TraesCSU01G016900.1	Wheat	cytosol	69.5	76.56
GSMUA_Achr8P19290_001	Banana	cytosol	71.81	76.56
Os02t0126400-01	Rice	cytosol	69.5	75.1
HORVU6Hr1G014700.6	Barley	cytosol, mitochondrion, plastid	69.68	75.0
KXG29360	Sorghum	plastid	69.68	74.86
Zm00001d015100_P002	Maize	plastid	68.97	74.52
GSMUA_Achr5P18720_001	Banana	plastid	71.45	71.08
PGSC0003DMT400066365	Potato	cytosol	45.39	43.54
PGSC0003DMT400001990	Potato	cytosol	45.39	43.39
PGSC0003DMT400021598	Potato	mitochondrion	43.79	43.03
PGSC0003DMT400008340	Potato	cytosol	43.09	40.64
PGSC0003DMT400021055	Potato	cytosol	37.41	40.27
PGSC0003DMT400026076	Potato	cytosol	44.5	39.16
PGSC0003DMT400083474	Potato	cytosol	36.88	39.1
PGSC0003DMT400027809	Potato	cytosol	36.88	39.02
PGSC0003DMT400034291	Potato	cytosol	35.28	36.99
PGSC0003DMT400069175	Potato	plastid	34.04	35.82

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102590362	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0ZVQ4	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400003564
PGSC:PGSC0003DMG400003564	EnsemblPlants:PGSC0003DMT400009177	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF246	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BCC0	RefSeq:XP_006340738.1
SEG:seg	:	:	:	:	:

Description

Calcium-dependent protein kinase CPK4 [Source:PGSC_GENE;Acc:PGSC0003DMG400003564]

Coordinates

chr2:-:39352916..39358965

Molecular Weight (calculated)

63600.0 Da

IEP (calculated)

9.898

GRAVY (calculated)

-0.550

Length

564 amino acids

Sequence
(BLAST)

001: MGNICFSSSK VSGSNSNTPS TTNTATVNGH RNRRSSAKPV SATTNTSRKQ EGSHYNRQKG KDNGGVKQQT KNVKHNTRRQ SGVIPCGKRT DFGYDKDFDK
101: KFTIGKLLGH GQFGYTYVAT DKSNGNRVAV KRIEKKKMVV PIAVEDVKRE VKILKALAGH ENVVDFYNAF EDDNYVYIVM ELCEGGELLD RILAKKDSRY
201: TEKDAAIVVG QMLKVAAQCH LHGLVHRDMK PENFLFKSPK EDSPLKATDF GLSDFIRPGK KFQDIVGSAY YVAPEVLKRK SGPESDVWSI GVITFILLCG
301: RRPFWDKTED GIFKEVLRNK PDFRRKPWPT ISNSAKDFVK KLLVKDPRAR LTAAQALSHP WVREGGDASE IPLDISVLSN MRQFVKYSRL KQFALRALAS
401: TLDEEELADV RDQFSAIDVD KNGVISLEEM RQALAKDLPW KMKESRVLEI LQAIDSNTDG LVDFPEFVAA TLHVHQLEEH NLLKWQQRSQ TAFEKFDVDR
501: DGFITPEELR MHTGLKGSID PLLEEADIDK DGKISLSEFR RLLRTASISS RMVTSPTVRG SRKI

Best Arabidopsis Sequence Match ( AT2G17890.1 )
(BLAST)

001: MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY
101: AKDFDHRYTI GKLLGHGQFG YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN SVYIVMELCE GGELLDRILA
201: RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS
301: YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA QALSHPWVRE GGDASEIPID ISVLNNMRQF VKFSRLKQFA
401: LRALATTLDE EELADLRDQF DAIDVDKNGV ISLEEMRQAL AKDHPWKLKD ARVAEILQAI DSNTDGFVDF GEFVAAALHV NQLEEHDSEK WQQRSRAAFE
501: KFDIDGDGFI TAEELRMHTG LKGSIEPLLE EADIDNDGKI SLQEFRRLLR TASIKSRNVR SPPGYLISRK V

Arabidopsis Description

CPK16Calcium-dependent protein kinase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.