Factsheet for Solyc05g041110.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062990.1.1	Tomato	cytosol	85.71	67.61
Solyc10g050080.1.1	Tomato	cytosol	83.04	65.49
Solyc04g049100.1.1	Tomato	cytosol	82.14	64.79
Solyc06g008830.1.1	Tomato	cytosol	58.93	64.71
Solyc10g061860.1.1	Tomato	cytosol	69.64	55.71
Solyc10g078390.1.1	Tomato	cytosol	83.93	16.38
Zm00001d015462_P001	Maize	cytosol	57.14	15.72
Zm00001d041051_P001	Maize	cytosol	48.21	15.13
Zm00001d037645_P001	Maize	cytosol	47.32	14.85
Solyc01g108400.2.1	Tomato	cytosol	76.79	14.63
Solyc02g090510.2.1	Tomato	nucleus	77.68	14.33
Solyc02g065070.2.1	Tomato	cytosol	74.11	14.04
Solyc01g096350.2.1	Tomato	cytosol, nucleus	71.43	13.58
Solyc03g082500.2.1	Tomato	nucleus	70.54	13.21
Solyc03g033540.2.1	Tomato	extracellular	54.46	10.8
Solyc03g113390.2.1	Tomato	cytosol	50.89	10.59
Solyc09g005550.2.1	Tomato	cytosol	50.0	10.59
Solyc11g065660.1.1	Tomato	cytosol	50.0	10.51
Solyc01g008440.2.1	Tomato	cytosol	50.0	10.51
Solyc10g079130.1.1	Tomato	nucleus	48.21	10.29
Solyc12g005030.1.1	Tomato	cytosol	33.04	10.28
Solyc02g083850.2.1	Tomato	plastid	51.79	10.18
Solyc06g073350.2.1	Tomato	plastid	48.21	10.07

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	UniProt:K4C092
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF92
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc05g041110.1	EnsemblPlants:Solyc05g041110.1.1	UniParc:UPI00027662C6

Description

No Description!

Coordinates

chr5:-:49395644..49397161

Molecular Weight (calculated)

12770.4 Da

IEP (calculated)

5.187

GRAVY (calculated)

-0.106

Length

112 amino acids

Sequence
(BLAST)

001: MTTTITIEDV RREVKILRGE LLYRILSRGG KYSEDDAKDI MIQLLSVVSY CHLQRVVHRD LKLENFLFIS TDENSPLKAI DFGLSDYVKP DERLSDIVGS
101: ALCVTVYARS DS

Best Arabidopsis Sequence Match ( AT2G41140.1 )
(BLAST)

001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA

Arabidopsis Description

CRK1CDPK-related kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80673]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.