Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_06s0009g01910.t01 | |
| VIT_08s0040g00470.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31950.1 | VIT_06s0009g01910.t01 | AT2G41100.1 | 17360592 |
| AT4G31950.1 | VIT_08s0040g00470.t01 | AT2G41100.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61225 | Soybean | nucleus | 78.56 | 78.71 |
| PGSC0003DMT400039871 | Potato | cytosol | 65.46 | 74.03 |
| Solyc12g088970.1.1 | Tomato | endoplasmic reticulum | 72.11 | 72.11 |
| CDY53704 | Canola | endoplasmic reticulum, extracellular | 68.69 | 69.22 |
| CDY23316 | Canola | extracellular, golgi | 68.5 | 69.02 |
| Bra010214.1-P | Field mustard | extracellular, golgi | 68.69 | 68.95 |
| VIT_09s0002g09210.t01 | Wine grape | cytosol | 9.49 | 67.57 |
| AT4G31940.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 67.17 | 67.56 |
| AT4G31970.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 64.71 | 65.2 |
| AT4G31950.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 63.19 | 65.04 |
| VIT_12s0035g00570.t01 | Wine grape | cytosol | 27.89 | 63.91 |
| VIT_03s0063g01500.t01 | Wine grape | cytosol | 16.13 | 63.91 |
| VIT_00s0189g00110.t01 | Wine grape | cytosol | 22.01 | 63.04 |
| VIT_18s0001g11490.t01 | Wine grape | cytosol | 32.07 | 62.83 |
| VIT_18s0001g11540.t01 | Wine grape | cytosol | 17.46 | 62.59 |
| VIT_03s0063g01590.t01 | Wine grape | cytosol | 20.11 | 62.35 |
| VIT_03s0063g01630.t01 | Wine grape | cytosol | 32.26 | 62.27 |
| VIT_18s0001g11410.t01 | Wine grape | cytosol | 30.17 | 60.69 |
| VIT_18s0001g11430.t01 | Wine grape | endoplasmic reticulum, extracellular | 58.82 | 60.31 |
| VIT_18s0001g11470.t01 | Wine grape | endoplasmic reticulum, extracellular | 58.44 | 59.92 |
| VIT_03s0063g01600.t01 | Wine grape | extracellular | 6.45 | 59.65 |
| VIT_03s0063g01530.t01 | Wine grape | cytosol | 51.04 | 59.65 |
| VIT_03s0063g01650.t01 | Wine grape | cytosol | 53.13 | 59.57 |
| VIT_03s0063g01640.t01 | Wine grape | nucleus | 25.43 | 59.03 |
| VIT_18s0001g11520.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 58.63 | 58.86 |
| VIT_03s0063g01520.t01 | Wine grape | cytosol | 16.13 | 58.62 |
| VIT_18s0001g11450.t01 | Wine grape | cytosol | 30.17 | 58.24 |
| VIT_03s0063g01690.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.69 | 57.69 |
| VIT_09s0002g09270.t01 | Wine grape | endoplasmic reticulum | 51.61 | 57.38 |
| VIT_07s0255g00090.t01 | Wine grape | endoplasmic reticulum, golgi | 57.12 | 57.01 |
| VIT_03s0063g01490.t01 | Wine grape | cytosol | 10.06 | 56.99 |
| VIT_03s0063g01480.t01 | Wine grape | endoplasmic reticulum, extracellular | 55.79 | 56.98 |
| VIT_18s0001g11500.t01 | Wine grape | endoplasmic reticulum | 56.55 | 56.65 |
| VIT_00s1216g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 55.22 | 56.18 |
| VIT_03s0063g01660.t01 | Wine grape | cytosol | 11.76 | 55.86 |
| VIT_03s0063g01560.t01 | Wine grape | endoplasmic reticulum | 57.12 | 55.84 |
| VIT_09s0002g09250.t01 | Wine grape | endoplasmic reticulum, golgi | 54.65 | 55.6 |
| VIT_09s0002g09200.t01 | Wine grape | extracellular, golgi | 53.89 | 54.83 |
| VIT_12s0035g00610.t01 | Wine grape | extracellular, golgi | 53.89 | 54.72 |
| VIT_18s0001g11580.t01 | Wine grape | endoplasmic reticulum, golgi | 53.7 | 54.32 |
| VIT_03s0063g01680.t01 | Wine grape | cytosol | 18.6 | 53.85 |
| VIT_18s0001g11480.t01 | Wine grape | endoplasmic reticulum | 49.72 | 53.14 |
| KRH51926 | Soybean | endoplasmic reticulum | 35.29 | 53.14 |
| VIT_12s0035g00560.t01 | Wine grape | endoplasmic reticulum, extracellular | 48.01 | 52.93 |
| VIT_03s0063g01550.t01 | Wine grape | cytosol | 13.28 | 51.09 |
| VIT_03s0063g01540.t01 | Wine grape | cytosol | 11.01 | 49.15 |
| VIT_03s0063g01580.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 19.73 | 43.33 |
| VIT_00s1216g00010.t01 | Wine grape | mitochondrion | 10.06 | 35.81 |
| VIT_18s0001g11570.t01 | Wine grape | cytosol, mitochondrion | 55.03 | 32.12 |
| VIT_04s0044g01610.t01 | Wine grape | endoplasmic reticulum, extracellular | 55.41 | 28.38 |
| VIT_18s0001g11560.t01 | Wine grape | endoplasmic reticulum | 56.55 | 25.06 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:100247206 | wikigene:100247206 | MapMan:50.1.13 | ProteinID:CBI19595 | ProteinID:CBI19595.3 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | UniProt:E0CPD8 | EMBL:FN595227 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016705 | GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 | GO:GO:0044550 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | EntrezGene:LOC100247206 | wikigene:LOC100247206 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF111 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| UniParc:UPI00019853BC | ArrayExpress:VIT_18s0001g11400 | EnsemblPlantsGene:VIT_18s0001g11400 | EnsemblPlants:VIT_18s0001g11400.t01 | RefSeq:XP_002284031 | RefSeq:XP_002284031.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:9699734..9701502
Molecular Weight (calculated)
59154.8 Da
IEP (calculated)
8.448
GRAVY (calculated)
-0.042
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPALHLPAF FVFLSLIYVF YAMLGRKKII KSSKSRDAPE PGGAWPIIGH LHLLGGGDQL LYRTLGAMAD KYGPAFNIRL GSRRAFVVSS WEVAKECFTI
101: NDKALATRPT TVAAKHMGYN YAVFGFAPYS PFWREMRKIA TLELLSNRRL EILKHVRTSE VDMGIRELYG LWVKNSSRPL LVELNRWLED MTLNVIVRMV
201: AGKRYFGAAA ASDSSEARRC QKAISQFFRL IGIFVVSDAL PFLWWLDLQG HERAMKTTAK ELDSILEGWL EEHRQRRVSS LIKAEGEQDF IDVMLSLQEE
301: GRLSGFQYDS ETSIKSTCLA LILGGSDTTA GTLTWAISLL LNNRHALKKA QEELDLCVGM ERQVEESDVK NLVYLQAIIK ETLRLYPAGP LLGPREALDD
401: CTVAGYNVPA GTRLIVNIWK LQRDPSVWTN PCAFQPERFL NAHADVDVKG QQFELMPFGS GRRSCPGVSF ALQVLHLTLA RLLHAFELST PVDQPVDMTE
501: SSGLTIPKAT PLEVLLTPRL NSKLYAF
101: NDKALATRPT TVAAKHMGYN YAVFGFAPYS PFWREMRKIA TLELLSNRRL EILKHVRTSE VDMGIRELYG LWVKNSSRPL LVELNRWLED MTLNVIVRMV
201: AGKRYFGAAA ASDSSEARRC QKAISQFFRL IGIFVVSDAL PFLWWLDLQG HERAMKTTAK ELDSILEGWL EEHRQRRVSS LIKAEGEQDF IDVMLSLQEE
301: GRLSGFQYDS ETSIKSTCLA LILGGSDTTA GTLTWAISLL LNNRHALKKA QEELDLCVGM ERQVEESDVK NLVYLQAIIK ETLRLYPAGP LLGPREALDD
401: CTVAGYNVPA GTRLIVNIWK LQRDPSVWTN PCAFQPERFL NAHADVDVKG QQFELMPFGS GRRSCPGVSF ALQVLHLTLA RLLHAFELST PVDQPVDMTE
501: SSGLTIPKAT PLEVLLTPRL NSKLYAF
001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
Arabidopsis Description
CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.