Factsheet for AT4G31940.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 6
endoplasmic reticulum 6
plasma membrane 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G31950.1	Thale cress	endoplasmic reticulum, extracellular, golgi	86.64	88.67
AT4G31970.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	88.36	88.53
CDY23316	Canola	extracellular, golgi	88.17	88.34
CDY53704	Canola	endoplasmic reticulum, extracellular	88.17	88.34
Bra010214.1-P	Field mustard	extracellular, golgi	87.98	87.81
VIT_18s0001g11400.t01	Wine grape	endoplasmic reticulum, golgi	67.56	67.17
KRH61225	Soybean	nucleus	66.98	66.73
PGSC0003DMT400039871	Potato	cytosol	57.25	64.38
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	62.98	62.62
KRH51926	Soybean	endoplasmic reticulum	31.3	46.86
AT2G25160.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	42.37	42.13
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	40.65	41.36

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:829324	UniProt:A0A178V6C0	ProteinID:AEE85981.1	ArrayExpress:AT4G31940
EnsemblPlantsGene:AT4G31940	RefSeq:AT4G31940	TAIR:AT4G31940	RefSeq:AT4G31940-TAIR-G	EnsemblPlants:AT4G31940.1	TAIR:AT4G31940.1
EMBL:AY090995	Unigene:At.31700	ProteinID:CAA16595.1	ProteinID:CAB79912.1	Symbol:CYP82C4	ncoils:Coil
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
GO:GO:0071281	InterPro:IPR036396	RefSeq:NP_194922.1	ProteinID:OAP00572.1	PFAM:PF00067	PO:PO:0009005
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF111	UniProt:Q9SZ46
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00000A1DAA	SEG:seg	:	:

Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]

Coordinates

chr4:+:15451988..15454224

Molecular Weight (calculated)

58922.8 Da

IEP (calculated)

7.892

GRAVY (calculated)

-0.102

Length

524 amino acids

Sequence
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.