CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23316	Canola	extracellular, golgi	99.24	99.24
Bra010214.1-P	Field mustard	extracellular, golgi	98.28	97.9
AT4G31940.1	Thale cress	endoplasmic reticulum, extracellular, golgi	88.34	88.17
AT4G31970.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	84.7	84.7
AT4G31950.1	Thale cress	endoplasmic reticulum, extracellular, golgi	82.41	84.18
KRH61225	Soybean	nucleus	69.22	68.82
VIT_18s0001g11400.t01	Wine grape	endoplasmic reticulum, golgi	69.22	68.69
PGSC0003DMT400039871	Potato	cytosol	60.04	67.38
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	65.39	64.9
KRH51926	Soybean	endoplasmic reticulum	31.74	47.43
CDY61596	Canola	endoplasmic reticulum	38.05	44.42
CDY42361	Canola	peroxisome	23.33	44.36
CDY52276	Canola	endoplasmic reticulum	37.67	43.97
CDY46700	Canola	cytosol	38.62	43.82
CDY58132	Canola	endoplasmic reticulum, golgi, vacuole	35.76	41.01
CDY30201	Canola	extracellular, golgi	41.11	40.64
CDY46698	Canola	extracellular, golgi, plasma membrane	40.73	40.26
CDY35307	Canola	cytosol	14.34	39.68
CDY42360	Canola	endoplasmic reticulum, plastid	10.9	39.31
CDY60874	Canola	endoplasmic reticulum, extracellular, plasma membrane	38.43	38.73
CDY35308	Canola	extracellular, plastid	11.28	37.34

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078IWE0	UniProt:A0A078IWE0	EnsemblPlants:CDY53704	ProteinID:CDY53704
ProteinID:CDY53704.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011262001
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF111	SUPFAM:SSF48264	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE1813	SEG:seg

Description

BnaC03g67210DBnaC03g67210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWE0]

Coordinates

chrLK033229:-:33121..35411

Molecular Weight (calculated)

58812.5 Da

IEP (calculated)

8.352

GRAVY (calculated)

-0.156

Length

523 amino acids

Sequence
(BLAST)

001: MDAFLFSLLS PLLVFVLIAL FKKKKKPKHV KAPEPSGAWP IIGHLHLLGG KEQLLYRTLG EMANRYGPAM SLRLGSSEAF VVSSFEVAKE CFTVNDKALA
101: SRPMTAAAKH MGYNYAVFGF APYSSFWREM RKIATIELLS NRRLQMLKHV RVSEISMGVK DLYSLWVKKG GSEPVMVNLK RWLEDMTLNM IVRMVAGKRY
201: FGGGSTTPED TEEARQCQKA ITKFFHLIGI FTMSDAFPTL GWFDLQGHEK EMKKTGSELD VILERWIENH RQQRKVSGNK ENDSDFIDVM LSLAEQGKLS
301: HLQYDANTSI KSTCLALILG GSDTTASTLT WAIALLLNNK DMLKKAQDEI DLQVGTDRNV EDSDIENLVY LQAIIKETLR LYPAGPLLGP REAMEDCTIA
401: GYHVSCGTRL IVNVWKIQRD PKVWVEPNEF RPERFLTGEA KEFDVRGQNF ELIPFGSGRR SCPGSSLAMQ VLHLGLARFL HSFDVKTDLD VAVDMSESPG
501: LTIPKATPLE VMISPRLEKH LFA

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.