CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 3
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52276	Canola	endoplasmic reticulum	98.21	98.21
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	83.71	72.82
PGSC0003DMT400004789	Potato	cytosol	25.89	56.04
PGSC0003DMT400004790	Potato	endoplasmic reticulum, golgi	49.78	43.05
Solyc09g059240.2.1	Tomato	endoplasmic reticulum, extracellular	49.33	42.66
PGSC0003DMT400038700	Potato	mitochondrion	48.66	42.66
CDY42361	Canola	peroxisome	26.12	42.55
KRH07449	Soybean	endoplasmic reticulum	49.78	42.08
KRH07447	Soybean	endoplasmic reticulum, golgi	49.78	41.22
KRH66130	Soybean	endoplasmic reticulum, golgi	47.77	40.61
CDY35307	Canola	cytosol	16.29	38.62
CDY53704	Canola	endoplasmic reticulum, extracellular	44.42	38.05
CDY23316	Canola	extracellular, golgi	44.42	38.05
CDY46700	Canola	cytosol	37.5	36.44
CDY58132	Canola	endoplasmic reticulum, golgi, vacuole	34.38	33.77
CDY60874	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.38	31.41
CDY30201	Canola	extracellular, golgi	35.49	30.06
CDY46698	Canola	extracellular, golgi, plasma membrane	35.27	29.87
CDY42360	Canola	endoplasmic reticulum, plastid	8.26	25.52
CDY35308	Canola	extracellular, plastid	8.04	22.78

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078JB43	UniProt:A0A078JB43	EnsemblPlants:CDY61596	ProteinID:CDY61596
ProteinID:CDY61596.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00034089001
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF327	SUPFAM:SSF48264	UniParc:UPI0004EEDD68	:	:	:

Description

BnaC03g74240DBnaC03g74240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB43]

Coordinates

chrLK034015:-:35953..38074

Molecular Weight (calculated)

51298.5 Da

IEP (calculated)

7.656

GRAVY (calculated)

-0.165

Length

448 amino acids

Sequence
(BLAST)

001: MSDKLGPIFS LKLGFYRLVV TSDPEILKDC FTTNDLVLAT RPNIAFGRYV GYNNAALALA PYGDYWRELR KITTVHLFSN QSVEMLGHIR YSEVNEFLKH
101: LYEGSDGTST VKIDMLFEFL TFNIILRKMV GKRIGFGKVK SEEWRYKEAL KRSEYLAAVF MIGDVIPWLG WLDFAKIAQM KSTFKELDSV ITKWLAEHLE
201: KRSRKEKNQE KTIMDLLLDI LPEDVVICGH VRDVIVKATI LVVTLTGSDS TSITLTWAIS LLLNNPSTLK AAQEEIDNSV GKGRWVEESD IRNLKYLQAI
301: VKETHRLYPP APLTGIREAR EDCLLGEYHV KRGSRLLVNI WKLHRDPKIW HDPETFKPER FMEEKSLCEK SDFEFIPFSS GRRSCPGMNL GLRVVHLVLA
401: RLIQGFELHK ASDEPLDMAE GPGLALPKIN PVEVMAMPRL EPELYHSL

Best Arabidopsis Sequence Match ( AT3G25180.1 )
(BLAST)

001: MTFLFSTLQL SLFSLALVIF GYIFLRKQLS RCEVDSSTIP EPLGALPLFG HLHLLRGKKL LCKKLAAMSQ KHGPIFSLKL GFYRLVVASD PKTVKDCFTT
101: NDLATATRPN IAFGRYVGYN NASLTLAPYG DYWRELRKIV TVHLFSNHSI EMLGHIRSSE VNTLIKHLYK GNGGTSIVKI DMLFEFLTFN IILRKMVGKR
201: IGFGEVNSDE WRYKEALKHC EYLAVIPMIG DVIPWLGWLD FAKNSQMKRL FKELDSVNTK WLHEHLKKRS RNEKDQERTI MDLLLDILPE DIVISGHVRD
301: VIVKATILAL TLTGSDSTSI TLTWAVSLLL NNPAALEAAQ EEIDNSVGKG RWIEESDIQN LKYLQAIVKE THRLYPPAPL TGIREAREDC FVGGYRVEKG
401: TRLLVNIWKL HRDPKIWPDP KTFKPERFME DKSQCEKSNF EYIPFGSGRR SCPGVNLGLR VVHFVLARLL QGFELHKVSD EPLDMAEGPG LALPKINPVE
501: VVVMPRLDPK LYSLL

Arabidopsis Description

CYP82G1Cytochrome P450 82G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF8]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.