Factsheet for PGSC0003DMT400004789

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082322	Potato	cytosol	25.6	48.62
PGSC0003DMT400004790	Potato	endoplasmic reticulum, golgi	100.0	39.96
PGSC0003DMT400038700	Potato	mitochondrion	87.44	35.42
Bra013227.1-P	Field mustard	endoplasmic reticulum	56.04	25.89
CDY52276	Canola	endoplasmic reticulum	56.04	25.89
CDY61596	Canola	endoplasmic reticulum	56.04	25.89
KRH07449	Soybean	endoplasmic reticulum	61.84	24.15
PGSC0003DMT400051969	Potato	endoplasmic reticulum, extracellular	60.39	24.04
PGSC0003DMT400039871	Potato	cytosol	53.14	23.61
KRH07447	Soybean	endoplasmic reticulum, golgi	61.35	23.48
KRH66130	Soybean	endoplasmic reticulum, golgi	59.42	23.34
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	56.04	22.52
PGSC0003DMT400008634	Potato	endoplasmic reticulum, extracellular	55.07	21.88
PGSC0003DMT400008635	Potato	endoplasmic reticulum, extracellular	53.62	21.72
PGSC0003DMT400008625	Potato	endoplasmic reticulum, golgi	54.11	21.66
PGSC0003DMT400011829	Potato	endoplasmic reticulum, extracellular	54.59	21.32
PGSC0003DMT400056767	Potato	endoplasmic reticulum	53.14	21.11
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	53.14	20.99
PGSC0003DMT400008624	Potato	extracellular, golgi	50.72	20.55
PGSC0003DMT400008622	Potato	endoplasmic reticulum, golgi	47.83	20.04
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	47.34	18.6
PGSC0003DMT400069148	Potato	endoplasmic reticulum, golgi	47.83	18.17
PGSC0003DMT400085819	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M0ZNZ3	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG402001903	PGSC:PGSC0003DMG402001903	EnsemblPlants:PGSC0003DMT400004789
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF327	SUPFAM:SSF48264
UniParc:UPI00029630C9	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG402001903]

Coordinates

chr9:-:16868796..16869419

Molecular Weight (calculated)

23806.7 Da

IEP (calculated)

7.060

GRAVY (calculated)

-0.373

Length

207 amino acids

Sequence
(BLAST)

001: MTASESTAET LIWALSMLIN GTRSLKLAQD ELEEHVGRNR WVEESDIKNL PYLQAIVKET LRLYPPGPLA GPREAIEDCY VGNYHIKKGT RLIVNLWKLQ
101: RDSRIWEDPN EFKPERWFLK EHSEFNFRGQ NFEYIPFSSG RRMCPGLTFG SQVVHLTLAK LLHGFNISTT REEPIDLSEG LGIALPKVKP LQPFVSPRLA
201: VELYQNL

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.