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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • plastid 2
  • extracellular 5
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 6
  • vacuole 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400082322 Potato cytosol 20.38 99.08
PGSC0003DMT400075815 Potato endoplasmic reticulum, extracellular 63.96 64.33
VIT_12s0035g00570.t01 Wine grape cytosol 27.36 63.04
VIT_00s0189g00110.t01 Wine grape cytosol 21.89 63.04
PGSC0003DMT400004789 Potato cytosol 21.32 54.59
PGSC0003DMT400072524 Potato endoplasmic reticulum, extracellular 53.21 53.82
PGSC0003DMT400051969 Potato endoplasmic reticulum, extracellular 50.75 51.73
VIT_09s0002g09270.t01 Wine grape endoplasmic reticulum 44.72 50.0
VIT_00s1216g00020.t01 Wine grape endoplasmic reticulum, extracellular 48.68 49.81
PGSC0003DMT400069148 Potato endoplasmic reticulum, golgi 50.57 49.17
VIT_09s0002g09250.t01 Wine grape endoplasmic reticulum, golgi 47.55 48.65
VIT_09s0002g09200.t01 Wine grape extracellular, golgi 46.6 47.68
VIT_12s0035g00610.t01 Wine grape extracellular, golgi 45.85 46.82
VIT_12s0035g00560.t01 Wine grape endoplasmic reticulum, extracellular 41.51 46.03
PGSC0003DMT400008625 Potato endoplasmic reticulum, golgi 43.96 45.07
PGSC0003DMT400039871 Potato cytosol 39.62 45.06
PGSC0003DMT400004790 Potato endoplasmic reticulum, golgi 43.77 44.79
PGSC0003DMT400038700 Potato mitochondrion 42.64 44.23
PGSC0003DMT400056767 Potato endoplasmic reticulum 43.4 44.15
KRH07450 Soybean endoplasmic reticulum, extracellular 43.02 43.76
PGSC0003DMT400008622 Potato endoplasmic reticulum, golgi 40.19 43.12
PGSC0003DMT400008634 Potato endoplasmic reticulum, extracellular 42.08 42.8
PGSC0003DMT400008624 Potato extracellular, golgi 40.94 42.47
PGSC0003DMT400085819 Potato cytosol 11.89 42.0
PGSC0003DMT400008635 Potato endoplasmic reticulum, extracellular 40.38 41.88
VIT_00s1216g00010.t01 Wine grape mitochondrion 8.68 31.08
VIT_04s0044g01610.t01 Wine grape endoplasmic reticulum, extracellular 46.42 23.91
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396
UniProt:M1A093PFAM:PF00067EnsemblPlantsGene:PGSC0003DMG400004647PGSC:PGSC0003DMG400004647EnsemblPlants:PGSC0003DMT400011829PRINTS:PR00385
PRINTS:PR00463PANTHER:PTHR24298PANTHER:PTHR24298:SF223SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0002951E29
SEG:seg:::::
Description
Cytochrome P450 CYP82E4v2 nicotine demethylase [Source:PGSC_GENE;Acc:PGSC0003DMG400004647]
Coordinates
chr12:+:60411417..60419534
Molecular Weight (calculated)
60605.7 Da
IEP (calculated)
7.095
GRAVY (calculated)
-0.052
Length
530 amino acids
Sequence
(BLAST)
001: MEDYIFSHFN AILLLIAFIF SSIFIWKLLK PQNPLPPEIS GGWPVIGHLL QFSGADDIPL SRKLATLADK YGPVFTFRLG LPCILVVSSY DAVKDCLSTN
101: DIAFAARPAS LAGEYIGYNN AMLFLANYGP YWRKIRKIVL QEVLSSSRLE KLKFVRVSEI QTSINELYSL ISVAGEIVDF PVKVNVTNWI EKLTLSLIVK
201: MIAGKSYGRV EKGGNEEEAE RFKKALKDFM FISMEFVLWD AFPIALFKWI DFQGHVKFMK RTFKDIDCVL QNWLDEHLKK KERVDVVDGN EQDFIDVMLS
301: MMSNEDFADG HSRETTIKAT ALSMVLDASD TTAIHLNWVM ATLLNHRDVM KKVQEELDTK VGRNRWVEES DIKNLVYFQA VVKETLRLYP PAPLLVPHES
401: IEDCIVQGYH IPKGTRLWVN TMKLQRDPKI WSNPNTFDPE RFLTSQAGCD VRGQQYEFIP FGSRRRSCPG ITYAIQVTHL AIAHLLQGFD FSTPSNEPLD
501: MKEGLGMTMR KVNPIEVMIT PRFPSVLYKF
Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)
001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN
Arabidopsis Description
CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.