Factsheet for PGSC0003DMT400038700

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 6
golgi 6
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g059240.2.1	Tomato	endoplasmic reticulum, extracellular	91.39	90.15
PGSC0003DMT400004789	Potato	cytosol	35.42	87.44
PGSC0003DMT400004790	Potato	endoplasmic reticulum, golgi	82.78	81.66
KRH07449	Soybean	endoplasmic reticulum	51.47	49.62
PGSC0003DMT400082322	Potato	cytosol	10.57	49.54
KRH07447	Soybean	endoplasmic reticulum, golgi	51.66	48.8
Bra013227.1-P	Field mustard	endoplasmic reticulum	42.66	48.66
CDY61596	Canola	endoplasmic reticulum	42.66	48.66
CDY52276	Canola	endoplasmic reticulum	42.66	48.66
PGSC0003DMT400039871	Potato	cytosol	44.03	48.28
PGSC0003DMT400051969	Potato	endoplasmic reticulum, extracellular	48.34	47.5
KRH66130	Soybean	endoplasmic reticulum, golgi	48.73	47.25
PGSC0003DMT400008625	Potato	endoplasmic reticulum, golgi	46.97	46.42
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	46.97	45.8
PGSC0003DMT400008634	Potato	endoplasmic reticulum, extracellular	45.79	44.91
PGSC0003DMT400008624	Potato	extracellular, golgi	44.23	44.23
PGSC0003DMT400008635	Potato	endoplasmic reticulum, extracellular	44.23	44.23
PGSC0003DMT400056767	Potato	endoplasmic reticulum	45.01	44.15
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	44.42	44.08
PGSC0003DMT400011829	Potato	endoplasmic reticulum, extracellular	44.23	42.64
PGSC0003DMT400008622	Potato	endoplasmic reticulum, golgi	40.7	42.11
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	42.86	41.56
PGSC0003DMT400069148	Potato	endoplasmic reticulum, golgi	41.49	38.9
PGSC0003DMT400085819	Potato	cytosol	9.59	32.67

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102585194	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1B795	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400014954	PGSC:PGSC0003DMG400014954
EnsemblPlants:PGSC0003DMT400038700	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF327
SUPFAM:SSF48264	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296553C	RefSeq:XP_006340061.1	SEG:seg

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400014954]

Coordinates

chr9:-:31325401..31329289

Molecular Weight (calculated)

58087.7 Da

IEP (calculated)

8.160

GRAVY (calculated)

-0.095

Length

511 amino acids

Sequence
(BLAST)

001: MYFLSHLLPL LVAWFLALFV ARKFKSRNIT SAAIGAPKAP GAWPFIGHLH LLNGHLPVCR TLGLMADKYG PIFQLQLGDH PAIVVSNWEI VKDCFTANND
101: KIFSSRPNMA VSKYLGYNGA VFAMAPYGPY WRDIRKMVTV ELLTHSRLEK LKHVRTSEVN CCIKELYSNC PSQVNLSSWF ENITCNIIVR MLAGKRFTGC
201: AEEMNFKESI KKALYLGGAF VFSDAIPWLE WMDIGGHIKA MKETYKEVDS VFDSWLKQHI NSIGDGEQSD FIDIMLSTLP EETNMESAAY NRHAIIKATT
301: LILIMTASES TAETLIWALS LLMNNTHSLK LAQNELDEQI GRNKWVEESD IKNLPYLQAI VKETLRLYPP GPLAGPREAI EDCYIGKYHI KKGTRLIVNL
401: WKLQRDSRIW EDPNEFKPER WFLNEHTNIN FRGQHFEYIP FSSGRRMCPG LTFATQVVHL TLAKLLHGFN ISMPKEEPVD VSEGLGIALP KVKPLQPLLS
501: PRLAVELYQS L

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.