Factsheet for PGSC0003DMT400004790

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004789	Potato	cytosol	39.96	100.0
PGSC0003DMT400038700	Potato	mitochondrion	81.66	82.78
KRH07449	Soybean	endoplasmic reticulum	51.16	50.0
Bra013227.1-P	Field mustard	endoplasmic reticulum	43.05	49.78
CDY52276	Canola	endoplasmic reticulum	43.05	49.78
CDY61596	Canola	endoplasmic reticulum	43.05	49.78
KRH07447	Soybean	endoplasmic reticulum, golgi	51.35	49.17
PGSC0003DMT400082322	Potato	cytosol	10.23	48.62
PGSC0003DMT400051969	Potato	endoplasmic reticulum, extracellular	48.65	48.46
PGSC0003DMT400039871	Potato	cytosol	43.44	48.28
KRH66130	Soybean	endoplasmic reticulum, golgi	48.84	48.01
PGSC0003DMT400008625	Potato	endoplasmic reticulum, golgi	45.75	45.84
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	45.17	45.44
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	44.98	44.47
PGSC0003DMT400008634	Potato	endoplasmic reticulum, extracellular	44.59	44.34
PGSC0003DMT400011829	Potato	endoplasmic reticulum, extracellular	44.79	43.77
PGSC0003DMT400056767	Potato	endoplasmic reticulum	44.02	43.76
PGSC0003DMT400008635	Potato	endoplasmic reticulum, extracellular	42.47	43.05
PGSC0003DMT400008624	Potato	extracellular, golgi	42.08	42.66
PGSC0003DMT400008622	Potato	endoplasmic reticulum, golgi	39.96	41.9
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	41.89	41.18
PGSC0003DMT400069148	Potato	endoplasmic reticulum, golgi	41.31	39.27
PGSC0003DMT400085819	Potato	cytosol	9.65	33.33

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102586474	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M0ZNZ4	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG401001903	PGSC:PGSC0003DMG401001903
EnsemblPlants:PGSC0003DMT400004790	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF327
SUPFAM:SSF48264	SignalP:SignalP-noTM	UniParc:UPI00029520D6	RefSeq:XP_006346673.1	SEG:seg	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG401001903]

Coordinates

chr9:-:16868634..16871432

Molecular Weight (calculated)

58899.2 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.154

Length

518 amino acids

Sequence
(BLAST)

001: MYFLSELLAL SIAWLLALFV ACKYKTRNRE TVAPKAPGAL PFIGHLYLLS GDLPVCRILG LMTDKYGPIF QLQLGSHPAL VVSSWEMVKD CFTAGNDKIF
101: ASRPSMALSK YLGYNGAIFA LAPYGQYWRD IRKMVTVELL TNSRLEKLKH VRTSEVNCSI KDLYSNCSSN NNSEVNLSSW FENITFNIII RMLVGKRFTG
201: CFEAEMNFKE SIKKVLYLGG TFVFSDAIPS IEWMDIGGHI KSMKQTYKEV DSVLDSWLKQ HIEKRKDCDS NSSGSDQSDF FDVMLSTLPE ETMESGYDRN
301: AIIKATALIL IMTASESTAE TLIWALSMLI NGTRSLKLAQ DELEEHVGRN RWVEESDIKN LPYLQAIVKE TLRLYPPGPL AGPREAIEDC YVGNYHIKKG
401: TRLIVNLWKL QRDSRIWEDP NEFKPERWFL KEHSEFNFRG QNFEYIPFSS GRRMCPGLTF GSQVVHLTLA KLLHGFNIST TREEPIDLSE GLGIALPKVK
501: PLQPFVSPRL AVELYQNL

Best Arabidopsis Sequence Match ( AT3G25180.1 )
(BLAST)

001: MTFLFSTLQL SLFSLALVIF GYIFLRKQLS RCEVDSSTIP EPLGALPLFG HLHLLRGKKL LCKKLAAMSQ KHGPIFSLKL GFYRLVVASD PKTVKDCFTT
101: NDLATATRPN IAFGRYVGYN NASLTLAPYG DYWRELRKIV TVHLFSNHSI EMLGHIRSSE VNTLIKHLYK GNGGTSIVKI DMLFEFLTFN IILRKMVGKR
201: IGFGEVNSDE WRYKEALKHC EYLAVIPMIG DVIPWLGWLD FAKNSQMKRL FKELDSVNTK WLHEHLKKRS RNEKDQERTI MDLLLDILPE DIVISGHVRD
301: VIVKATILAL TLTGSDSTSI TLTWAVSLLL NNPAALEAAQ EEIDNSVGKG RWIEESDIQN LKYLQAIVKE THRLYPPAPL TGIREAREDC FVGGYRVEKG
401: TRLLVNIWKL HRDPKIWPDP KTFKPERFME DKSQCEKSNF EYIPFGSGRR SCPGVNLGLR VVHFVLARLL QGFELHKVSD EPLDMAEGPG LALPKINPVE
501: VVVMPRLDPK LYSLL

Arabidopsis Description

CYP82G1Cytochrome P450 82G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF8]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.