Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 6
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056767 | Potato | endoplasmic reticulum | 85.88 | 85.22 |
| PGSC0003DMT400008634 | Potato | endoplasmic reticulum, extracellular | 71.37 | 70.83 |
| PGSC0003DMT400008635 | Potato | endoplasmic reticulum, extracellular | 69.25 | 70.06 |
| PGSC0003DMT400008622 | Potato | endoplasmic reticulum, golgi | 53.19 | 55.67 |
| PGSC0003DMT400008624 | Potato | extracellular, golgi | 54.74 | 55.38 |
| VIT_18s0001g11580.t01 | Wine grape | endoplasmic reticulum, golgi | 55.32 | 54.89 |
| PGSC0003DMT400004789 | Potato | cytosol | 21.66 | 54.11 |
| KRH61222 | Soybean | cytosol | 14.7 | 53.9 |
| PGSC0003DMT400082322 | Potato | cytosol | 11.22 | 53.21 |
| KRH51922 | Soybean | endoplasmic reticulum | 52.61 | 50.84 |
| KRH51923 | Soybean | plastid | 53.19 | 50.83 |
| PGSC0003DMT400039871 | Potato | cytosol | 45.07 | 50.0 |
| PGSC0003DMT400038700 | Potato | mitochondrion | 46.42 | 46.97 |
| PGSC0003DMT400004790 | Potato | endoplasmic reticulum, golgi | 45.84 | 45.75 |
| PGSC0003DMT400011829 | Potato | endoplasmic reticulum, extracellular | 45.07 | 43.96 |
| PGSC0003DMT400075815 | Potato | endoplasmic reticulum, extracellular | 44.29 | 43.45 |
| PGSC0003DMT400051969 | Potato | endoplasmic reticulum, extracellular | 43.52 | 43.27 |
| PGSC0003DMT400072524 | Potato | endoplasmic reticulum, extracellular | 43.71 | 43.13 |
| PGSC0003DMT400069148 | Potato | endoplasmic reticulum, golgi | 41.78 | 39.63 |
| PGSC0003DMT400085819 | Potato | cytosol | 9.48 | 32.67 |
| VIT_18s0001g11570.t01 | Wine grape | cytosol, mitochondrion | 54.35 | 31.12 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:102587044 | MapMan:50.1.13 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | UniProt:M0ZUU7 |
| PFAM:PF00067 | EnsemblPlantsGene:PGSC0003DMG400003342 | PGSC:PGSC0003DMG400003342 | EnsemblPlants:PGSC0003DMT400008625 | PRINTS:PR00385 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF210 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI000296281B |
| RefSeq:XP_006366435.1 | SEG:seg | : | : | : | : |
Description
Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400003342]
Coordinates
chr4:-:69002598..69004477
Molecular Weight (calculated)
59299.0 Da
IEP (calculated)
7.032
GRAVY (calculated)
-0.151
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSLIALTL AISFLSFFYV RKLFFSAKKQ SKNVPEAAGA WPIIGHLHLL NGPQMPHKIF GQMAEKYGPI FRLKLGVNDV VIVSDHKIAK ECFTTNDKAF
101: ANRPKSIASE ILGYNYAMFG LGPYGPYWRE IRKIVTTEFL SARRIEMLKH VREFEVKSAV KETYEYWLKN NLNGAVKIEM KEWFGNLIMN TMVKLLFGVQ
201: YTGNEDEERS KAHKAIQRLL ELLGAFVVAD FLPYLRWLDI GGHEKIMKST AKEIDFIVED WLAEHRRKRK LRGNNCGDEE DFMDVMLSIC EDKNLHGFDT
301: DAIIKATCMA LQTAGTDTTI VTLIWILSLL LNNYEALKKA QDELDTHIGK NRWVQESDIK NLVYLQAIVK ESFRLYPAAP LMLPHESIED CVVSGYDIPK
401: GTRLLVNVWK LQYDPEIWPN PHEFKPERFL TTHKDVDVRG NHFELIPFGS GRRMCPGVSL ALQVLQYVVS VLLQGFDIKR PSDEAIDMSE SFGLTILKAS
501: PLEVQLTPRL DSNLYYE
101: ANRPKSIASE ILGYNYAMFG LGPYGPYWRE IRKIVTTEFL SARRIEMLKH VREFEVKSAV KETYEYWLKN NLNGAVKIEM KEWFGNLIMN TMVKLLFGVQ
201: YTGNEDEERS KAHKAIQRLL ELLGAFVVAD FLPYLRWLDI GGHEKIMKST AKEIDFIVED WLAEHRRKRK LRGNNCGDEE DFMDVMLSIC EDKNLHGFDT
301: DAIIKATCMA LQTAGTDTTI VTLIWILSLL LNNYEALKKA QDELDTHIGK NRWVQESDIK NLVYLQAIVK ESFRLYPAAP LMLPHESIED CVVSGYDIPK
401: GTRLLVNVWK LQYDPEIWPN PHEFKPERFL TTHKDVDVRG NHFELIPFGS GRRMCPGVSL ALQVLQYVVS VLLQGFDIKR PSDEAIDMSE SFGLTILKAS
501: PLEVQLTPRL DSNLYYE
001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
Arabidopsis Description
CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.