Factsheet for PGSC0003DMT400056767

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008625	Potato	endoplasmic reticulum, golgi	85.22	85.88
PGSC0003DMT400008634	Potato	endoplasmic reticulum, extracellular	70.06	70.06
PGSC0003DMT400008635	Potato	endoplasmic reticulum, extracellular	66.99	68.3
PGSC0003DMT400008622	Potato	endoplasmic reticulum, golgi	53.17	56.07
PGSC0003DMT400008624	Potato	extracellular, golgi	54.13	55.19
VIT_18s0001g11580.t01	Wine grape	endoplasmic reticulum, golgi	55.09	55.09
KRH61222	Soybean	cytosol	14.78	54.61
PGSC0003DMT400004789	Potato	cytosol	21.11	53.14
PGSC0003DMT400082322	Potato	cytosol	10.94	52.29
KRH51922	Soybean	endoplasmic reticulum	52.4	51.03
PGSC0003DMT400039871	Potato	cytosol	45.11	50.43
KRH51923	Soybean	plastid	52.21	50.28
PGSC0003DMT400038700	Potato	mitochondrion	44.15	45.01
PGSC0003DMT400004790	Potato	endoplasmic reticulum, golgi	43.76	44.02
PGSC0003DMT400011829	Potato	endoplasmic reticulum, extracellular	44.15	43.4
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	42.99	42.75
PGSC0003DMT400051969	Potato	endoplasmic reticulum, extracellular	42.23	42.31
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	41.84	41.37
PGSC0003DMT400069148	Potato	endoplasmic reticulum, golgi	39.92	38.17
VIT_18s0001g11570.t01	Wine grape	cytosol, mitochondrion	54.32	31.34
PGSC0003DMT400085819	Potato	cytosol	8.25	28.67

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102591317	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1BZV5
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400022075	PGSC:PGSC0003DMG400022075	EnsemblPlants:PGSC0003DMT400056767	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF210	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0002949804
RefSeq:XP_006364811.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400022075]

Coordinates

chr5:+:34686001..34688062

Molecular Weight (calculated)

59900.9 Da

IEP (calculated)

8.075

GRAVY (calculated)

-0.172

Length

521 amino acids

Sequence
(BLAST)

001: MDLSVIALTL AISFLSFFYL RKFFFAAHTR NRGVPEPTGA WPIIGHLHLL NGSQMPHKIF GQMAEKYGPI FRLKLGVNQV VIVSDHKIAK ECFTTNDRAF
101: ANRPKSLASE ILGYNYAMFG LGPYGPYWRE IRKIVTIEFL SARRIKMLKH VREFEVKLAV RETYEYWLKN NSSSNLNGAV KMEMKEWFGN LIMNSMVKML
201: FGVQYTDKED EERNKAQKAI RRFLELFGVS VVADFLPYLR WLDIGGHEKA MKETAKEMDF IIEDWLAEHR RKRKLRGNKC GDEDDFMDVM LSICEDKDLH
301: GFDADTIIKA TCVVMLLAGV DTTVVTLTWT LSLLLNNYQS LKKAKDELDT HIGKNRCVQE SDIKNLIYLQ AIVKESFRLY PATPLSLPHE SIEDCVVSGY
401: NIPKGTRLVL NISKLHYDPE IWPNPQEFKP ERFLTTHKDV DVRGNHFELI PFGSGRRMCP GVSLALQVVE YVLAVLLQGF EIKRPSDEAI DMSESFGLTI
501: LKASPLEVHL TPRLNSYLYY E

Best Arabidopsis Sequence Match ( AT4G31970.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKHV KAPAPSGAWP IIGHLHLLSG KEQLLYRTLG KMADQYGPAM SLRLGSSETF VVSSFEVAKD CFTVNDKALA
101: SRPITAAAKH MGYDCAVFGF APYSAFWREM RKIATLELLS NRRLQMLKHV RVSEISMVMQ DLYSLWVKKG GSEPVMVDLK SWLEDMSLNM MVRMVAGKRY
201: FGGGSLSPED AEEARQCRKG VANFFHLVGI FTVSDAFPKL GWFDFQGHEK EMKQTGRELD VILERWIENH RQQRKVSGTK HNDSDFVDVM LSLAEQGKFS
301: HLQHDAITSI KSTCLALILG GSETSPSTLT WAISLLLNNK DMLKKAQDEI DIHVGRDRNV EDSDIENLVY IQAIIKETLR LYPAGPLLGH REAIEDCTVA
401: GYNVRRGTRM LVNVWKIQRD PRVYMEPNEF RPERFITGEA KEFDVRGQNF ELMPFGSGRR SCPGSSLAMQ VLHLGLARFL QSFDVKTVMD MPVDMTESPG
501: LTIPKATPLE ILISPRLKEG LYV

Arabidopsis Description

CYP82C2Cytochrome P450 82C2 [Source:UniProtKB/Swiss-Prot;Acc:O49394]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.