Factsheet for VIT_04s0044g01610.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0035g00570.t01	Wine grape	cytosol	17.69	79.13
VIT_09s0002g09210.t01	Wine grape	cytosol	5.64	78.38
VIT_00s1216g00020.t01	Wine grape	endoplasmic reticulum, extracellular	37.61	74.71
VIT_00s0189g00110.t01	Wine grape	cytosol	13.31	74.46
VIT_09s0002g09250.t01	Wine grape	endoplasmic reticulum, golgi	36.44	72.39
VIT_09s0002g09270.t01	Wine grape	endoplasmic reticulum	33.24	72.15
VIT_12s0035g00610.t01	Wine grape	extracellular, golgi	36.25	71.87
VIT_09s0002g09200.t01	Wine grape	extracellular, golgi	36.05	71.62
VIT_12s0035g00560.t01	Wine grape	endoplasmic reticulum, extracellular	33.04	71.13
PGSC0003DMT400082322	Potato	cytosol	6.41	60.55
VIT_03s0063g01500.t01	Wine grape	cytosol	7.58	58.65
VIT_18s0001g11400.t01	Wine grape	endoplasmic reticulum, golgi	28.38	55.41
VIT_03s0063g01640.t01	Wine grape	nucleus	12.05	54.63
VIT_03s0063g01630.t01	Wine grape	cytosol	14.48	54.58
VIT_03s0063g01520.t01	Wine grape	cytosol	7.68	54.48
VIT_03s0063g01530.t01	Wine grape	cytosol	23.23	52.99
VIT_03s0063g01590.t01	Wine grape	cytosol	8.75	52.94
VIT_03s0063g01650.t01	Wine grape	cytosol	24.1	52.77
VIT_03s0063g01690.t01	Wine grape	endoplasmic reticulum, extracellular	26.34	51.42
VIT_18s0001g11540.t01	Wine grape	cytosol	7.29	51.02
VIT_18s0001g11490.t01	Wine grape	cytosol	13.31	50.93
VIT_03s0063g01600.t01	Wine grape	extracellular	2.82	50.88
VIT_00s1216g00010.t01	Wine grape	mitochondrion	7.29	50.68
VIT_03s0063g01480.t01	Wine grape	endoplasmic reticulum, extracellular	25.36	50.58
VIT_03s0063g01680.t01	Wine grape	cytosol	8.94	50.55
KRH07450	Soybean	endoplasmic reticulum, extracellular	25.36	50.1
VIT_18s0001g11410.t01	Wine grape	cytosol	12.73	50.0
PGSC0003DMT400051969	Potato	endoplasmic reticulum, extracellular	25.07	49.62
VIT_03s0063g01560.t01	Wine grape	endoplasmic reticulum	25.75	49.17
VIT_03s0063g01550.t01	Wine grape	cytosol	6.51	48.91
VIT_18s0001g11470.t01	Wine grape	endoplasmic reticulum, extracellular	24.39	48.83
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	24.59	48.28
VIT_18s0001g11430.t01	Wine grape	endoplasmic reticulum, extracellular	24.0	48.05
VIT_07s0255g00090.t01	Wine grape	endoplasmic reticulum, golgi	24.59	47.92
VIT_18s0001g11520.t01	Wine grape	endoplasmic reticulum, plasma membrane	24.39	47.81
Solyc10g081550.1.1	Tomato	nucleus	24.3	47.71
VIT_18s0001g11500.t01	Wine grape	endoplasmic reticulum	24.3	47.53
VIT_18s0001g11580.t01	Wine grape	endoplasmic reticulum, golgi	23.62	46.64
VIT_18s0001g11450.t01	Wine grape	cytosol	12.34	46.52
PGSC0003DMT400011829	Potato	endoplasmic reticulum, extracellular	23.91	46.42
VIT_03s0063g01490.t01	Wine grape	cytosol	4.18	46.24
Solyc10g039210.2.1	Tomato	extracellular, golgi	23.32	46.07
VIT_03s0063g01540.t01	Wine grape	cytosol	5.25	45.76
VIT_03s0063g01660.t01	Wine grape	cytosol	4.86	45.05
VIT_18s0001g11480.t01	Wine grape	endoplasmic reticulum	21.19	44.22
Solyc04g007940.2.1	Tomato	endoplasmic reticulum, extracellular	22.16	43.02
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	21.77	42.5
PGSC0003DMT400069148	Potato	endoplasmic reticulum, golgi	22.35	42.2
Solyc06g073570.2.1	Tomato	extracellular, golgi	22.25	42.17
VIT_03s0063g01580.t01	Wine grape	endoplasmic reticulum, golgi, plastid	9.14	39.17
PGSC0003DMT400085819	Potato	cytosol	5.25	36.0
VIT_18s0001g11570.t01	Wine grape	cytosol, mitochondrion	23.52	26.8
VIT_18s0001g11560.t01	Wine grape	endoplasmic reticulum	25.17	21.78

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100258522	wikigene:100258522	EntrezGene:100263671	wikigene:100263671	MapMan:50.1.13
EMBL:AM454711	ProteinID:CAN81014	ProteinID:CAN81014.1	ProteinID:CCB60396	ProteinID:CCB60396.1	ncoils:Coil
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6I0D0	EMBL:FN596506
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100258522	wikigene:LOC100258522	EntrezGene:LOC100263671	wikigene:LOC100263671
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF223
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000210A7CB	ArrayExpress:VIT_04s0044g01610	EnsemblPlantsGene:VIT_04s0044g01610	EnsemblPlants:VIT_04s0044g01610.t01
RefSeq:XP_002264473	RefSeq:XP_002264473.1	RefSeq:XP_002264520	RefSeq:XP_002264520.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:23261671..23273050

Molecular Weight (calculated)

115801.0 Da

IEP (calculated)

7.731

GRAVY (calculated)

-0.065

Length

1029 amino acids

Sequence
(BLAST)

0001: MDLLTHLLAF AGLFLGLLYW YNRWRVRTLT HNSKGISAPK PPGAWPIIGH LHLLSGQVPI FRTLGAMADK HGPVFMIQLG MHPAVVVSSH EAVKECFTTN
0101: DKVFASRPRS SVSKLLGYNY AGFGFAPYGP FWREMRKLSV VEILSARRLN ELKDVRISEL DACIQDLYSL GKDNNWISPI EVVMSEWFEH LTFNFVLRMI
0201: AGKRYFDNAV HGNEEARGAI IAIKKFLSLS GAFVPSDVFP FLERLDLKGY LGSMKHVAEE LDCLVGSWVE EHVMRLKSEP GSRHDFIDVL LSAVQDTSMF
0301: GHSRETVIKA TIGNLIVGGS DSTSITSTWI LSALLNNREA MKRAQEELDL KVGRSRWVEE SDIQKLDYLR AIIKESLRLY SAAPLLVPHE ATQDCHVCGY
0401: HIPKGTRLFV NAWKLHRDPR VWSNPEEFEP ERFLGSHANL DVFGHQFELI PFGSGRRACP GINMALQMLH LTFARLLQGF DMATPSNAPV DMTEGISFTM
0501: PKLTPLCVTD ALKKSGLESS NLILGIDFTK SDEWIVRTLT HNSKGISAPK PPGAWPIIGH LHLLSGQVPI FRTLGAMADK HGPVFMIQLG MHPAVVVSSH
0601: EAVKECFTTN DKVFASRPRS SVSKLLGYNY AMFGSAPYGL FWREMRKLSV VEILSARRLN ELKDVRISEL DACIKDLYSL GKDNNWISPI KVVMSEWFEH
0701: LTFNFALRMI AGKRYFDNAV HGNEEARGAI ITIKKYLSLS GAFVPSDVFP FLERLDLQGY LGSMKHVTEE LDCLVGSWVE EHVMRLKSEP GCRHDFIDVL
0801: LSTVQDTSMF GHTRETVIKA TIVNLIVGGS DSTSITSTWI LSALLNNREA MKHAQEELDL KVGRSRWVEE SDIQKLDYLR AIIKESLRLY PAAPLLVPHE
0901: ATQDCHVCGY HIPKGTRLFV NAWKLHRDPR VWSNPEEFEP ERFLGSHANL DVFGHQFELI PFGSGRRACP GINMALQMLH LTFARLLQGF DMATPSNAPV
1001: DMTEGISFTM PKLTPLRVML TPRLPSHLY

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.