Factsheet for VIT_03s0063g01680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01640.t01	Wine grape	nucleus	86.26	69.16
VIT_03s0063g01490.t01	Wine grape	cytosol	33.52	65.59
VIT_03s0063g01590.t01	Wine grape	cytosol	57.14	61.18
VIT_18s0001g11540.t01	Wine grape	cytosol	47.8	59.18
VIT_03s0063g01520.t01	Wine grape	cytosol	39.01	48.97
VIT_03s0063g01630.t01	Wine grape	cytosol	65.38	43.59
VIT_12s0035g00570.t01	Wine grape	cytosol	40.66	32.17
VIT_18s0001g11410.t01	Wine grape	cytosol	44.51	30.92
VIT_18s0001g11490.t01	Wine grape	cytosol	45.6	30.86
VIT_18s0001g11450.t01	Wine grape	cytosol	44.51	29.67
VIT_03s0063g01530.t01	Wine grape	cytosol	67.58	27.27
VIT_00s0189g00110.t01	Wine grape	cytosol	26.37	26.09
VIT_03s0063g01650.t01	Wine grape	cytosol	65.93	25.53
VIT_03s0063g01480.t01	Wine grape	endoplasmic reticulum, extracellular	67.58	23.84
VIT_03s0063g01690.t01	Wine grape	endoplasmic reticulum, extracellular	66.48	22.96
VIT_03s0063g01560.t01	Wine grape	endoplasmic reticulum	66.48	22.45
VIT_09s0002g09270.t01	Wine grape	endoplasmic reticulum	54.4	20.89
VIT_09s0002g09250.t01	Wine grape	endoplasmic reticulum, golgi	54.4	19.11
VIT_07s0255g00090.t01	Wine grape	endoplasmic reticulum, golgi	54.95	18.94
VIT_18s0001g11400.t01	Wine grape	endoplasmic reticulum, golgi	53.85	18.6
VIT_09s0002g09200.t01	Wine grape	extracellular, golgi	52.75	18.53
VIT_18s0001g11480.t01	Wine grape	endoplasmic reticulum	48.35	17.85
VIT_12s0035g00560.t01	Wine grape	endoplasmic reticulum, extracellular	46.7	17.78
VIT_18s0001g11500.t01	Wine grape	endoplasmic reticulum	51.1	17.68
VIT_09s0002g09210.t01	Wine grape	cytosol	7.14	17.57
VIT_00s1216g00020.t01	Wine grape	endoplasmic reticulum, extracellular	49.45	17.37
VIT_18s0001g11470.t01	Wine grape	endoplasmic reticulum, extracellular	47.25	16.73
VIT_18s0001g11430.t01	Wine grape	endoplasmic reticulum, extracellular	47.25	16.73
VIT_18s0001g11520.t01	Wine grape	endoplasmic reticulum, plasma membrane	47.8	16.57
VIT_12s0035g00610.t01	Wine grape	extracellular, golgi	46.7	16.38
VIT_18s0001g11580.t01	Wine grape	endoplasmic reticulum, golgi	46.7	16.31
VIT_03s0063g01550.t01	Wine grape	cytosol	12.09	16.06
VIT_03s0063g01500.t01	Wine grape	cytosol	11.54	15.79
VIT_04s0044g01610.t01	Wine grape	endoplasmic reticulum, extracellular	50.55	8.94
VIT_18s0001g11570.t01	Wine grape	cytosol, mitochondrion	43.96	8.86
VIT_18s0001g11560.t01	Wine grape	endoplasmic reticulum	52.2	7.99
VIT_03s0063g01600.t01	Wine grape	extracellular	1.65	5.26
VIT_03s0063g01580.t01	Wine grape	endoplasmic reticulum, golgi, plastid	2.2	1.67
VIT_00s1216g00010.t01	Wine grape	mitochondrion	0.55	0.68
VIT_03s0063g01660.t01	Wine grape	cytosol	0.0	0.0
VIT_03s0063g01540.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB56931	ProteinID:CCB56931.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6HQH4	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550
GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	PANTHER:PTHR24298
PANTHER:PTHR24298:SF225	SUPFAM:SSF48264	UniParc:UPI0002108E61	ArrayExpress:VIT_03s0063g01680	EnsemblPlantsGene:VIT_03s0063g01680	EnsemblPlants:VIT_03s0063g01680.t01

Description

No Description!

Coordinates

chr3:+:5025603..5026440

Molecular Weight (calculated)

20507.6 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.227

Length

182 amino acids

Sequence
(BLAST)

001: MKRIAREVDQ VQGSWVEEHR RKRFSGSMNE AVQDFIHVML SVIDDGQFSD HDHDTVIKAT CLTLIIGGSD STVITLTWAL CPLMNNPSTL KRAQDELDIK
101: VGKHRQVDES DIKNLVYLQA IIKETLRLYP AAPLSVPREA MEDCTMADFH IQAGRAFWLT SGSCTGTPEF GRILWSSNLR GF

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.