Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g01500.t01 | Wine grape | cytosol | 84.21 | 36.09 |
| VIT_03s0063g01630.t01 | Wine grape | cytosol | 87.72 | 18.32 |
| VIT_03s0063g01550.t01 | Wine grape | cytosol | 42.11 | 17.52 |
| VIT_00s0189g00110.t01 | Wine grape | cytosol | 50.88 | 15.76 |
| VIT_12s0035g00570.t01 | Wine grape | cytosol | 50.88 | 12.61 |
| VIT_18s0001g11490.t01 | Wine grape | cytosol | 50.88 | 10.78 |
| VIT_18s0001g11410.t01 | Wine grape | cytosol | 45.61 | 9.92 |
| VIT_03s0063g01690.t01 | Wine grape | endoplasmic reticulum, extracellular | 91.23 | 9.87 |
| VIT_03s0063g01530.t01 | Wine grape | cytosol | 73.68 | 9.31 |
| VIT_03s0063g01560.t01 | Wine grape | endoplasmic reticulum | 85.96 | 9.09 |
| VIT_18s0001g11450.t01 | Wine grape | cytosol | 42.11 | 8.79 |
| VIT_03s0063g01650.t01 | Wine grape | cytosol | 71.93 | 8.72 |
| VIT_03s0063g01480.t01 | Wine grape | endoplasmic reticulum, extracellular | 73.68 | 8.14 |
| VIT_18s0001g11400.t01 | Wine grape | endoplasmic reticulum, golgi | 59.65 | 6.45 |
| VIT_18s0001g11470.t01 | Wine grape | endoplasmic reticulum, extracellular | 52.63 | 5.84 |
| VIT_12s0035g00610.t01 | Wine grape | extracellular, golgi | 52.63 | 5.78 |
| VIT_18s0001g11430.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.88 | 5.64 |
| VIT_00s1216g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.88 | 5.6 |
| VIT_18s0001g11580.t01 | Wine grape | endoplasmic reticulum, golgi | 49.12 | 5.37 |
| VIT_07s0255g00090.t01 | Wine grape | endoplasmic reticulum, golgi | 49.12 | 5.3 |
| VIT_09s0002g09270.t01 | Wine grape | endoplasmic reticulum | 42.11 | 5.06 |
| VIT_18s0001g11520.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 45.61 | 4.95 |
| VIT_18s0001g11500.t01 | Wine grape | endoplasmic reticulum | 45.61 | 4.94 |
| VIT_09s0002g09200.t01 | Wine grape | extracellular, golgi | 42.11 | 4.63 |
| VIT_09s0002g09250.t01 | Wine grape | endoplasmic reticulum, golgi | 42.11 | 4.63 |
| VIT_18s0001g11570.t01 | Wine grape | cytosol, mitochondrion | 49.12 | 3.1 |
| VIT_04s0044g01610.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.88 | 2.82 |
| VIT_18s0001g11560.t01 | Wine grape | endoplasmic reticulum | 43.86 | 2.1 |
| VIT_12s0035g00560.t01 | Wine grape | endoplasmic reticulum, extracellular | 14.04 | 1.67 |
| VIT_03s0063g01680.t01 | Wine grape | cytosol | 5.26 | 1.65 |
| VIT_09s0002g09210.t01 | Wine grape | cytosol | 1.75 | 1.35 |
| VIT_03s0063g01580.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 3.51 | 0.83 |
| VIT_03s0063g01520.t01 | Wine grape | cytosol | 1.75 | 0.69 |
| VIT_18s0001g11480.t01 | Wine grape | endoplasmic reticulum | 3.51 | 0.41 |
| VIT_03s0063g01490.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_03s0063g01540.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_03s0063g01590.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_18s0001g11540.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_03s0063g01640.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| VIT_03s0063g01660.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_00s1216g00010.t01 | Wine grape | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_03s0063g01600 | EMBL:FN596006 | EnsemblPlants:VIT_03s0063g01600.t01 | EnsemblPlantsGene:VIT_03s0063g01600 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0055114 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF225 | ProteinID:CCB56926 | ProteinID:CCB56926.1 | SignalP:SignalP-noTM |
| UniParc:UPI0002108E5C | UniProt:F6HQG9 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3:+:4988668..4988841
Molecular Weight (calculated)
6143.4 Da
IEP (calculated)
4.476
GRAVY (calculated)
0.258
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MTHLTLARLL HGFELGVVAD SPVDMTEGPG LTAPKATPLE VTIVSRLPFE LYSYEAS
001: MDTSLFSLFV SILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLRLGSSETF VGSSFEVAKD CFTVNDKALA
101: SLMTAAAKHM GYVFWLEMRK IAMIELLSNR RLQMLNNVRV SEISMGVKDL YSLWVKKGGS EPVMVDLKSW LEDMIANMIM RMVAGKRYFG GGGAESSEHT
201: EEARQWRKGI AKFFHLVGIF TVSDAFPKLG WLDLQGHEKE MKQTRRELDV ILERWIENHR QQRKVSGTKH NDSDFVDVML SLAEQGKLSH LQYDANTCIK
301: TTCLALILGG SETSPSTLTW AISLLLNNKD MLKKVQDEID IHVGRDRNVE DSDIKNLVYL QAIIKETLRL YPAAPLLGHR EAMEDCTVAG YNVPCGTRLI
401: VNVWKIQRDP KVYMEPNEFR PERFITGEAK DFDVRGQNFE LMPFGSGRRS CPGPSLAMQM LHLGLARFLH SFEVKTVLDR PVDMSESPGL TITKATPLEV
501: LINPRLKREL FV
101: SLMTAAAKHM GYVFWLEMRK IAMIELLSNR RLQMLNNVRV SEISMGVKDL YSLWVKKGGS EPVMVDLKSW LEDMIANMIM RMVAGKRYFG GGGAESSEHT
201: EEARQWRKGI AKFFHLVGIF TVSDAFPKLG WLDLQGHEKE MKQTRRELDV ILERWIENHR QQRKVSGTKH NDSDFVDVML SLAEQGKLSH LQYDANTCIK
301: TTCLALILGG SETSPSTLTW AISLLLNNKD MLKKVQDEID IHVGRDRNVE DSDIKNLVYL QAIIKETLRL YPAAPLLGHR EAMEDCTVAG YNVPCGTRLI
401: VNVWKIQRDP KVYMEPNEFR PERFITGEAK DFDVRGQNFE LMPFGSGRRS CPGPSLAMQM LHLGLARFLH SFEVKTVLDR PVDMSESPGL TITKATPLEV
501: LINPRLKREL FV
Arabidopsis Description
CYP82C3CYP82C3 [Source:UniProtKB/TrEMBL;Acc:A0A178UT04]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.