Factsheet for Solyc10g081550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072524	Potato	endoplasmic reticulum, extracellular	95.8	95.8
VIT_00s0189g00110.t01	Wine grape	cytosol	22.33	63.59
VIT_12s0035g00570.t01	Wine grape	cytosol	27.86	63.48
Solyc10g039210.2.1	Tomato	extracellular, golgi	60.11	60.46
Solyc04g007940.2.1	Tomato	endoplasmic reticulum, extracellular	49.62	49.06
VIT_12s0035g00610.t01	Wine grape	extracellular, golgi	47.9	48.36
VIT_09s0002g09270.t01	Wine grape	endoplasmic reticulum	42.94	47.47
Solyc06g073570.2.1	Tomato	extracellular, golgi	48.47	46.78
VIT_09s0002g09250.t01	Wine grape	endoplasmic reticulum, golgi	46.18	46.72
VIT_09s0002g09200.t01	Wine grape	extracellular, golgi	45.99	46.53
KRH07450	Soybean	endoplasmic reticulum, extracellular	46.18	46.45
VIT_12s0035g00560.t01	Wine grape	endoplasmic reticulum, extracellular	42.37	46.44
VIT_00s1216g00020.t01	Wine grape	endoplasmic reticulum, extracellular	45.42	45.95
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	45.23	44.97
Solyc09g059240.2.1	Tomato	endoplasmic reticulum, extracellular	44.08	44.59
Solyc04g079680.2.1	Tomato	plastid	41.98	42.31
Solyc04g079660.2.1	Tomato	endoplasmic reticulum, extracellular	41.79	42.2
Solyc04g079640.2.1	Tomato	plastid	40.65	41.04
VIT_00s1216g00010.t01	Wine grape	mitochondrion	7.06	25.0
VIT_04s0044g01610.t01	Wine grape	endoplasmic reticulum, extracellular	47.71	24.3

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4D342	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF223	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc10g081550.1	EnsemblPlants:Solyc10g081550.1.1
TMHMM:TMhelix	UniParc:UPI00027698EC	:	:	:	:

Description

No Description!

Coordinates

chr10:-:62589051..62591398

Molecular Weight (calculated)

60121.8 Da

IEP (calculated)

8.702

GRAVY (calculated)

-0.211

Length

524 amino acids

Sequence
(BLAST)

001: MFDNFYFNDL QITLATLLVF SLSIILWTRN WKSTKLPPKI PGSWPIIGHL RGFGDGENVP LARTFGKLSN QYGPIFTIKL GMYRYCVINN WEAAKDCFTI
101: NDKELAARPI SLAAEHYGYN YARFSFANYG PYYCQVRKLV LQNVLSSTRL EKVKNVRISE VEISIKELYN IWGKGENSNT INISKWFEKL TLNIIVKMIA
201: GKRYISLEKD QEAQCFRRAF AKIMYLAGEF ILYDAIPFKI FKYVDFQGHI KTMKQIYKDL DDILQSWVNE HMEKKKIEGD NNNEQDCIDS MLSVTKLEDF
301: KAYGYTRDTV IKAIVLSMIL DGSDTTAVHL TWLMSLLLNN PRVMNNAQKE IDSKVGKDRW IEESDIKDLV YLQAIVKEAL RLYPPAPLLV PHEAVEDCTV
401: AGYNIPKGTR LFANAWKIQR DPRVYSEPDK FIPERFLNEH SNVDARGQHF EFIPFGSGRR SCPGINFATQ VAHLTIGRLI QGFSFGTPSN LPVDMTEGQG
501: ITMPKAKPVE VVITPRLNSM LYEL

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.