Factsheet for Solyc04g079640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 2
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g079660.2.1	Tomato	endoplasmic reticulum, extracellular	87.67	87.67
Solyc04g079680.2.1	Tomato	plastid	87.67	87.5
PGSC0003DMT400008635	Potato	endoplasmic reticulum, extracellular	84.78	86.11
KRH61222	Soybean	cytosol	15.03	55.32
VIT_18s0001g11580.t01	Wine grape	endoplasmic reticulum, golgi	53.95	53.74
KRH51922	Soybean	endoplasmic reticulum	51.25	49.72
KRH51923	Soybean	plastid	51.64	49.54
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	48.94	48.2
Solyc09g059240.2.1	Tomato	endoplasmic reticulum, extracellular	44.89	44.98
Solyc10g039210.2.1	Tomato	extracellular, golgi	40.85	40.69
Solyc10g081550.1.1	Tomato	nucleus	41.04	40.65
Solyc04g007940.2.1	Tomato	endoplasmic reticulum, extracellular	40.66	39.81
Solyc06g073570.2.1	Tomato	extracellular, golgi	41.23	39.41
VIT_18s0001g11570.t01	Wine grape	cytosol, mitochondrion	53.18	30.56

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:K4BV44	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF210	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g079640.2	EnsemblPlants:Solyc04g079640.2.1	TMHMM:TMhelix
UniParc:UPI00027671B7	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:64032254..64034180

Molecular Weight (calculated)

58410.4 Da

IEP (calculated)

7.479

GRAVY (calculated)

-0.078

Length

519 amino acids

Sequence
(BLAST)

001: MDIFLIVIMV ASSSVFFFFL RKHAFSAKIH SKSKRVPGAG GAWPIIGHLH LLSGSETEQL PHKIMGRMAD KYGPIFGMKL GVHQVVVVSD PKLAKECFTT
101: NDLALAGRPK SMASEIVGYK HAMFALSAYG PYWRETRKIA TIELFSARRI EMLKHIREFE VKSGIKEIYS DWGKNNLNGV VKMEMKEWIG DLVMNTMGKI
201: LFGKGRRSNE DEGINKAHKA IRRFFELLGA FVVADFLPYL RWLDIGGHEK AMKEVSKEMD SVVEEWLTEH KTKRGIIKSG EEEDFMDVML SICEDRDLPG
301: FDADTAIKAN CMGLLSAGTD TTIVTLTWAL CLLLNNYEAL KKAQDELDAH VGNNRWVQES DIKNLVYLQA IVKEVLRLYP AGPLSVPHES MEDCVIGGYD
401: IPKGTRLLVN LWKIQHDPNI WPNPHEFKPE RFLSTHKDVD VKGNHFELMP FGSGRRMCPG ISLALQVVPF VIAVLLQGFD MKRPSDEAID MSESFGLTVL
501: KASPLQVLLA PRLASVLYE

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.