Factsheet for Solyc04g007940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075815	Potato	endoplasmic reticulum, extracellular	82.26	82.73
VIT_00s0189g00110.t01	Wine grape	cytosol	20.94	60.33
VIT_12s0035g00570.t01	Wine grape	cytosol	24.91	57.39
Solyc10g081550.1.1	Tomato	nucleus	49.06	49.62
VIT_09s0002g09270.t01	Wine grape	endoplasmic reticulum	42.64	47.68
Solyc10g039210.2.1	Tomato	extracellular, golgi	45.85	46.64
VIT_09s0002g09250.t01	Wine grape	endoplasmic reticulum, golgi	44.91	45.95
VIT_09s0002g09200.t01	Wine grape	extracellular, golgi	44.72	45.75
VIT_00s1216g00020.t01	Wine grape	endoplasmic reticulum, extracellular	43.96	44.98
Solyc06g073570.2.1	Tomato	extracellular, golgi	45.09	44.01
VIT_12s0035g00610.t01	Wine grape	extracellular, golgi	42.83	43.74
Solyc09g059240.2.1	Tomato	endoplasmic reticulum, extracellular	42.26	43.24
VIT_12s0035g00560.t01	Wine grape	endoplasmic reticulum, extracellular	38.3	42.47
Solyc04g079660.2.1	Tomato	endoplasmic reticulum, extracellular	41.51	42.39
KRH07450	Soybean	endoplasmic reticulum, extracellular	41.51	42.23
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	41.32	41.56
Solyc04g079680.2.1	Tomato	plastid	40.38	41.15
Solyc04g079640.2.1	Tomato	plastid	39.81	40.66
VIT_00s1216g00010.t01	Wine grape	mitochondrion	8.3	29.73
VIT_04s0044g01610.t01	Wine grape	endoplasmic reticulum, extracellular	43.02	22.16

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550
GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:K4BNV0	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF223	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g007940.2
EnsemblPlants:Solyc04g007940.2.1	TMHMM:TMhelix	UniParc:UPI0002766D79	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:-:1587191..1589705

Molecular Weight (calculated)

61286.2 Da

IEP (calculated)

7.188

GRAVY (calculated)

-0.271

Length

530 amino acids

Sequence
(BLAST)

001: MKFDLLLLLL SPMEAAIVAL LTLAFLFYFI LSTKKSSKLP LPPEIAGGWP VIGHLFYFND GDNRPLARKL SDLADKYGPV FTFRLGLHRM LVISSYDAVK
101: ECYTKNDAVF ANRPACLYGE YIGYNNAILF LANYGSYWRN IRKLIIQEVL SNSRLEKLKH VKIEKIRNEI KNLNSRIQNS EVKSVINLTD WLEKMNFGLI
201: VKMIAGKNYE SGGDGDEEVE RFRETFKKFL VLSMEFVLWD AFPIRLFKWI DFQGHVKLMK ETFKDIDSIS QRWLDEHVKR NTEVNEDEKY ERDFIDVMLS
301: KMSDERLHQG HSRDNAIKAT IFSMVMDAAD TVPHHINWGM TLLINNQHVL KKAQEEIDTK VGKARWIDDN DIKNLVYLQA IVKETLRLYP PSPLLVPHEN
401: TEECVVSGYR IPKGTRLYAN VMKLQLDPKV WPNPEQFNPD RFLSTDINFR GQDYEFIPFG SGRRSCPGIS YALQMEHLTI GHLIQGFNYQ TPSNEPLDLQ
501: EGIGMTMPKV NPVEVIITPR LATELYEKLS

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.