CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42361	Canola	peroxisome	90.48	62.18
CDY58132	Canola	endoplasmic reticulum, golgi, vacuole	89.95	37.28
CDY46700	Canola	cytosol	62.43	25.6
AT2G25160.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	66.14	23.72
CDY60874	Canola	endoplasmic reticulum, extracellular, plasma membrane	64.55	23.51
CDY46698	Canola	extracellular, golgi, plasma membrane	63.49	22.68
CDY30201	Canola	extracellular, golgi	60.85	21.74
KRH28537	Soybean	endoplasmic reticulum	49.21	17.29
KRH76923	Soybean	endoplasmic reticulum, extracellular	47.62	16.98
KRH28536	Soybean	extracellular, golgi	48.15	16.85
CDY52276	Canola	endoplasmic reticulum	39.68	16.74
VIT_07s0255g00090.t01	Wine grape	endoplasmic reticulum, golgi	46.56	16.67
KRH76922	Soybean	endoplasmic reticulum, extracellular	46.56	16.6
CDY61596	Canola	endoplasmic reticulum	38.62	16.29
KRH28535	Soybean	extracellular, vacuole	28.57	14.84
CDY53704	Canola	endoplasmic reticulum, extracellular	39.68	14.34
CDY23316	Canola	extracellular, golgi	39.15	14.15
CDY42360	Canola	endoplasmic reticulum, plastid	2.12	2.76
CDY35308	Canola	extracellular, plastid	2.12	2.53

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078HC04	UniProt:A0A078HC04	EnsemblPlants:CDY35307	ProteinID:CDY35307
ProteinID:CDY35307.1	InterPro:Cyt_P450	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00058271001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00463	PANTHER:PTHR24298
PANTHER:PTHR24298:SF207	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0004EE57A4	SEG:seg	:

Description

BnaC03g59160DBnaC03g59160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC04]

Coordinates

chrLK032349:-:393797..394824

Molecular Weight (calculated)

21563.0 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.322

Length

189 amino acids

Sequence
(BLAST)

001: MKRTAKELDE VVESWVEEHK KRRDECEKHY LDLLIEIFKN REIPGTTHGA HTTTKAICLN MVFAGSEPAI VVLVWAVSLL VNNPHELRKA QEELDQKIGR
101: DRVETLRLYP PLPLTTYRYV MEGFDIANGN FHVPAGTQVL VNDFDLATPF GQDVDMTESN GFVNLKASPL QVLINPRLPK SLYHVDRKV

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.