CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42360	Canola	endoplasmic reticulum, plastid	65.19	71.03
CDY58132	Canola	endoplasmic reticulum, golgi, vacuole	75.95	26.32
AT2G25160.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	61.39	18.41
CDY46698	Canola	extracellular, golgi, plasma membrane	49.37	14.74
CDY60874	Canola	endoplasmic reticulum, extracellular, plasma membrane	48.1	14.64
CDY30201	Canola	extracellular, golgi	48.1	14.37
KRH28535	Soybean	extracellular, vacuole	32.28	14.01
VIT_07s0255g00090.t01	Wine grape	endoplasmic reticulum, golgi	44.94	13.45
KRH76923	Soybean	endoplasmic reticulum, extracellular	44.3	13.21
CDY46700	Canola	cytosol	37.97	13.02
KRH76922	Soybean	endoplasmic reticulum, extracellular	43.04	12.83
KRH28536	Soybean	extracellular, golgi	43.67	12.78
KRH28537	Soybean	endoplasmic reticulum	43.04	12.64
CDY53704	Canola	endoplasmic reticulum, extracellular	37.34	11.28
CDY23316	Canola	extracellular, golgi	36.71	11.09
CDY61596	Canola	endoplasmic reticulum	22.78	8.04
CDY52276	Canola	endoplasmic reticulum	22.78	8.04
CDY35307	Canola	cytosol	2.53	2.12
CDY42361	Canola	peroxisome	3.16	1.82

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	GO:A0A078HET3	UniProt:A0A078HET3	EnsemblPlants:CDY35308	ProteinID:CDY35308
ProteinID:CDY35308.1	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00058272001	InterPro:IPR036396	PFAM:PF00067
PANTHER:PTHR24298	PANTHER:PTHR24298:SF207	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0004EE83D7	SEG:seg

Description

BnaC03g59150DBnaC03g59150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HET3]

Coordinates

chrLK032349:-:395076..395552

Molecular Weight (calculated)

17757.9 Da

IEP (calculated)

10.043

GRAVY (calculated)

0.188

Length

158 amino acids

Sequence
(BLAST)

001: MDLIQHLLFA LSLFSVSFFF GKSLLFSSKN KKRMAPMAPG AWPLFGHLTS FKSSKPTHVT FGDMAEVLGP VFAMKLGSYK VLIISSQEVA KECYTVHDKV
101: IDRIDLTASK ILGYDVSFLT FSPCGPYWKG MRKIATSELF STATIDKERL IWRLKTCT

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.