CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35308	Canola	extracellular, plastid	71.03	65.19
Bra038167.1-P	Field mustard	endoplasmic reticulum, plastid	97.93	28.86
CDY58132	Canola	endoplasmic reticulum, golgi, vacuole	68.28	21.71
AT2G25160.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	60.69	16.7
CDY46698	Canola	extracellular, golgi, plasma membrane	55.86	15.31
CDY46700	Canola	cytosol	47.59	14.97
CDY30201	Canola	extracellular, golgi	54.48	14.93
KRH28535	Soybean	extracellular, vacuole	36.55	14.56
CDY60874	Canola	endoplasmic reticulum, extracellular, plasma membrane	48.28	13.49
VIT_07s0255g00090.t01	Wine grape	endoplasmic reticulum, golgi	48.28	13.26
KRH76922	Soybean	endoplasmic reticulum, extracellular	46.21	12.64
KRH28537	Soybean	endoplasmic reticulum	46.9	12.64
KRH28536	Soybean	extracellular, golgi	46.9	12.59
KRH76923	Soybean	endoplasmic reticulum, extracellular	45.52	12.45
CDY53704	Canola	endoplasmic reticulum, extracellular	39.31	10.9
CDY23316	Canola	extracellular, golgi	38.62	10.71
CDY52276	Canola	endoplasmic reticulum	25.52	8.26
CDY61596	Canola	endoplasmic reticulum	25.52	8.26
CDY35307	Canola	cytosol	2.76	2.12
CDY42361	Canola	peroxisome	2.76	1.45

Protein Annotations

Gene3D:1.10.630.10	MapMan:35.1	GO:A0A078HV21	UniProt:A0A078HV21	EnsemblPlants:CDY42360	ProteinID:CDY42360
ProteinID:CDY42360.1	InterPro:Cyt_P450	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00074631001	InterPro:IPR036396	PFAM:PF00067	PANTHER:PTHR24298	PANTHER:PTHR24298:SF207	SUPFAM:SSF48264
UniParc:UPI0004EEC1F0	:	:	:	:	:

Description

BnaA09g15950DBnaA09g15950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV21]

Coordinates

chrLK032522:+:151220..151657

Molecular Weight (calculated)

16464.9 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.122

Length

145 amino acids

Sequence
(BLAST)

001: MAPMAPGAWP LFGHLSFFKS SKPTHVTFGD MVEVLGPVFM MKLGSYNVLI ISSQEVAKEC FTVHDKVIDR IDLTASKILG YDGSFLTFSS CGPYWKEMRK
101: IATWELISTT TTDKFKDSRE REVDMTFRDL YMRWEQEGGA KTGVL

Best Arabidopsis Sequence Match ( AT2G25160.1 )
(BLAST)

001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN

Arabidopsis Description

CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.