Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- endoplasmic reticulum 6
- plasma membrane 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46700 | Canola | cytosol | 61.29 | 70.07 |
| CDY42361 | Canola | peroxisome | 35.29 | 67.64 |
| Bra038167.1-P | Field mustard | endoplasmic reticulum, plastid | 62.24 | 66.67 |
| CDY35307 | Canola | cytosol | 23.72 | 66.14 |
| CDY58132 | Canola | endoplasmic reticulum, golgi, vacuole | 55.79 | 64.47 |
| CDY35308 | Canola | extracellular, plastid | 18.41 | 61.39 |
| CDY60874 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 60.15 | 61.08 |
| CDY42360 | Canola | endoplasmic reticulum, plastid | 16.7 | 60.69 |
| Bra024133.1-P | Field mustard | plastid | 57.12 | 60.56 |
| CDY30201 | Canola | extracellular, golgi | 60.15 | 59.92 |
| CDY46698 | Canola | extracellular, golgi, plasma membrane | 59.96 | 59.74 |
| KRH28536 | Soybean | extracellular, golgi | 49.91 | 48.7 |
| KRH76923 | Soybean | endoplasmic reticulum, extracellular | 48.58 | 48.3 |
| VIT_07s0255g00090.t01 | Wine grape | endoplasmic reticulum, golgi | 48.39 | 48.3 |
| KRH28537 | Soybean | endoplasmic reticulum | 49.15 | 48.14 |
| KRH76922 | Soybean | endoplasmic reticulum, extracellular | 48.39 | 48.11 |
| AT4G31950.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 41.18 | 42.38 |
| AT4G31940.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 42.13 | 42.37 |
| AT4G31970.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 41.75 | 42.06 |
| KRH28535 | Soybean | extracellular, vacuole | 28.84 | 41.76 |
| AT3G25180.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 36.43 | 37.28 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:817054 | ProteinID:AEC07664.1 | EMBL:AK229524 | ArrayExpress:AT2G25160 |
| EnsemblPlantsGene:AT2G25160 | RefSeq:AT2G25160 | TAIR:AT2G25160 | RefSeq:AT2G25160-TAIR-G | EnsemblPlants:AT2G25160.1 | TAIR:AT2G25160.1 |
| Unigene:At.39056 | EMBL:BT008597 | EMBL:BT014968 | Symbol:CYP82F1 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS |
| InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 |
| GO:GO:0044550 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_180088.1 | PFAM:PF00067 |
| PO:PO:0009005 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF207 |
| UniProt:Q7Y222 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0000162381 | : | : |
Description
CYP82F1At2g25160 [Source:UniProtKB/TrEMBL;Acc:Q7Y222]
Coordinates
chr2:-:10708993..10711281
Molecular Weight (calculated)
59957.4 Da
IEP (calculated)
9.008
GRAVY (calculated)
-0.066
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLIMLFLLS ALFIFPVLIL IKSRLRPKNK KSTAPMVPGA WPLLGHLHLF DTVNPTHVTF GAMADVYGPV FMAKLGSIKV MIINSKEVAK EIYTVHDKLL
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN
101: ERPELTASKL LGYNDSFLTF SPYGLYWREI RKIAVSELFS TSGVDMHMVS RAREADLAFR ALYVRWEKRG KPKEGVLVDM KQEFIDLTAN ISLMMVSGKR
201: YFGENPNCEV KEARRCGKLI REFLDYFALF LLSDVAPVLG FLDWKTKRGM KRTAKGLDKV AEGWIEEHKN KRSDHGRSEN DYLDILIKIL GQDKIPGLSD
301: THTKIKALCL NLVLAGSETA IVVLVWAVSL LLNNPHVLRK AQEELDSKIG KERVVEELDI KDLVYLQAIV KETFRLYPPV PLVAYRAVVE DFDIAFCKCH
401: VPAGTQLMVS AWKIHRDPNV WSNPEQFEPE RFLTSNRELD VGGQSYKFFP FGLGRRSCPA IPLGMRMVHY LLVRFLHSFD LARPSSQDVD MTESNGLVNH
501: KATPLEVNII PRLHKSLYEV DHIGTDN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.