Factsheet for AT4G31950.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 6
endoplasmic reticulum 6
plasma membrane 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G31940.1	Thale cress	endoplasmic reticulum, extracellular, golgi	88.67	86.64
AT4G31970.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	88.09	86.23
CDY23316	Canola	extracellular, golgi	84.18	82.41
CDY53704	Canola	endoplasmic reticulum, extracellular	84.18	82.41
Bra010214.1-P	Field mustard	extracellular, golgi	83.59	81.52
VIT_18s0001g11400.t01	Wine grape	endoplasmic reticulum, golgi	65.04	63.19
KRH61225	Soybean	nucleus	62.89	61.22
PGSC0003DMT400039871	Potato	cytosol	54.1	59.44
Solyc12g088970.1.1	Tomato	endoplasmic reticulum	59.96	58.25
KRH51926	Soybean	endoplasmic reticulum	31.05	45.43
AT2G25160.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	42.38	41.18
AT3G25180.1	Thale cress	endoplasmic reticulum, golgi, vacuole	39.84	39.61

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:829325	UniProt:A0A178UT04	ProteinID:AEE85982.1	ArrayExpress:AT4G31950
EnsemblPlantsGene:AT4G31950	RefSeq:AT4G31950	TAIR:AT4G31950	RefSeq:AT4G31950-TAIR-G	EnsemblPlants:AT4G31950.1	TAIR:AT4G31950.1
EMBL:AY142533	Unigene:At.31699	ProteinID:CAA16594.2	ProteinID:CAB79913.1	Symbol:CYP82C3	ncoils:Coil
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709
GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
RefSeq:NP_194923.1	UniProt:O49396	ProteinID:OAO96755.1	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF111	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00000AC2A6
SEG:seg	:	:	:	:	:

Description

CYP82C3CYP82C3 [Source:UniProtKB/TrEMBL;Acc:A0A178UT04]

Coordinates

chr4:+:15455083..15457121

Molecular Weight (calculated)

57889.8 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.150

Length

512 amino acids

Sequence
(BLAST)

001: MDTSLFSLFV SILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLRLGSSETF VGSSFEVAKD CFTVNDKALA
101: SLMTAAAKHM GYVFWLEMRK IAMIELLSNR RLQMLNNVRV SEISMGVKDL YSLWVKKGGS EPVMVDLKSW LEDMIANMIM RMVAGKRYFG GGGAESSEHT
201: EEARQWRKGI AKFFHLVGIF TVSDAFPKLG WLDLQGHEKE MKQTRRELDV ILERWIENHR QQRKVSGTKH NDSDFVDVML SLAEQGKLSH LQYDANTCIK
301: TTCLALILGG SETSPSTLTW AISLLLNNKD MLKKVQDEID IHVGRDRNVE DSDIKNLVYL QAIIKETLRL YPAAPLLGHR EAMEDCTVAG YNVPCGTRLI
401: VNVWKIQRDP KVYMEPNEFR PERFITGEAK DFDVRGQNFE LMPFGSGRRS CPGPSLAMQM LHLGLARFLH SFEVKTVLDR PVDMSESPGL TITKATPLEV
501: LINPRLKREL FV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.