Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 8
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31950.1 | KRG89812 | AT2G41100.1 | 17360592 |
| AT4G31950.1 | KRG94975 | AT2G41100.1 | 17360592 |
| AT4G31950.1 | KRH18664 | AT2G41100.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g11400.t01 | Wine grape | endoplasmic reticulum, golgi | 78.71 | 78.56 |
| PGSC0003DMT400039871 | Potato | cytosol | 66.54 | 75.11 |
| Solyc12g088970.1.1 | Tomato | endoplasmic reticulum | 73.0 | 72.87 |
| CDY53704 | Canola | endoplasmic reticulum, extracellular | 68.82 | 69.22 |
| CDY23316 | Canola | extracellular, golgi | 68.63 | 69.02 |
| Bra010214.1-P | Field mustard | extracellular, golgi | 68.63 | 68.76 |
| AT4G31940.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 66.73 | 66.98 |
| AT4G31970.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 65.78 | 66.16 |
| KRH51926 | Soybean | endoplasmic reticulum | 42.97 | 64.57 |
| AT4G31950.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 61.22 | 62.89 |
| KRH28536 | Soybean | extracellular, golgi | 54.94 | 53.52 |
| KRH76922 | Soybean | endoplasmic reticulum, extracellular | 53.8 | 53.4 |
| KRG93417 | Soybean | endoplasmic reticulum, extracellular | 52.66 | 53.07 |
| KRH18573 | Soybean | endoplasmic reticulum | 52.47 | 52.77 |
| KRH76923 | Soybean | endoplasmic reticulum, extracellular | 53.04 | 52.64 |
| KRH28537 | Soybean | endoplasmic reticulum | 53.61 | 52.42 |
| KRG93418 | Soybean | extracellular, golgi | 51.14 | 52.33 |
| KRH61223 | Soybean | cytosol | 18.25 | 51.89 |
| KRH61224 | Soybean | endoplasmic reticulum | 51.52 | 51.52 |
| KRG93421 | Soybean | endoplasmic reticulum | 51.33 | 51.14 |
| KRH61222 | Soybean | cytosol | 13.69 | 51.06 |
| KRG93424 | Soybean | extracellular, golgi | 50.95 | 51.05 |
| KRG93423 | Soybean | extracellular, golgi | 50.95 | 51.05 |
| KRH18576 | Soybean | extracellular, golgi | 50.95 | 50.85 |
| KRG93416 | Soybean | endoplasmic reticulum, extracellular | 50.57 | 50.47 |
| KRH51925 | Soybean | endoplasmic reticulum, vacuole | 50.0 | 49.53 |
| KRH70254 | Soybean | endoplasmic reticulum, golgi | 49.43 | 49.52 |
| KRH07449 | Soybean | endoplasmic reticulum | 49.81 | 49.43 |
| KRH51922 | Soybean | endoplasmic reticulum | 49.81 | 48.97 |
| KRH51923 | Soybean | plastid | 50.19 | 48.8 |
| KRH07447 | Soybean | endoplasmic reticulum, golgi | 49.81 | 48.43 |
| KRH12905 | Soybean | golgi, vacuole | 47.91 | 48.37 |
| KRH76155 | Soybean | extracellular, golgi | 48.1 | 48.1 |
| KRH28535 | Soybean | extracellular, vacuole | 33.27 | 48.08 |
| KRH07450 | Soybean | endoplasmic reticulum, extracellular | 47.53 | 47.98 |
| KRH66130 | Soybean | endoplasmic reticulum, golgi | 47.53 | 47.44 |
| KRH22207 | Soybean | endoplasmic reticulum | 46.77 | 47.13 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:100811993 | MapMan:50.1.13 | EMBL:ACUP02002158 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS |
| InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | EnsemblPlantsGene:GLYMA_04G035600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 | GO:GO:0019748 |
| GO:GO:0020037 | GO:GO:0044550 | GO:GO:0046872 | GO:GO:0055114 | UniProt:I1JTF2 | InterPro:IPR036396 |
| EnsemblPlants:KRH61225 | ProteinID:KRH61225 | ProteinID:KRH61225.1 | PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF111 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI000233A543 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:2823374..2825414
Molecular Weight (calculated)
59343.7 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.170
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSLQLTII AILVSLLVFL WHTKRNRGGS KNKSKEAPIP AGAWPLIGHL HLLGGDDQLL YRTLGTMADQ YGPAFNIWLG TRRAFVVSSW EVAKECFTSN
101: DKALASRPTT VAAKHMGYNY AVFGFAPYSP FWREMRKIAT LELLSNRRLE MLKHVMVSEL NMVMRDLYNS WVQNRSRPVL VELNRWLEDL TLNMVVRMVA
201: GKRYFGASAS CDNDDEARRC QKAINQFFHL IGIFVVSDAL PFLRWFDVQG HERAMKKTAK ELDAILEGWL KEHREQRVDG EIKAEGEQDF IDIMLSLQKG
301: GHLSNFQYDS DTSIKSTCLA LILGGSDTTA GTVTWAISLL LNNRQALKKA QEELDLNVGM ERQVEESDIR NLAYVQAIIK ETLRLYPAGP LLGPREAQED
401: CNVAGYHVPA GTRLVVNLWK IHRDPRVWQE PSAFRPERFL TSDAVDVRGQ NFELIPFGSG RRSCPGMSFA LQVLHLTLAR LLHAFEFATP SDQPVDMTES
501: PGLTIPKATP LEVLLTPRLP AKLYAC
101: DKALASRPTT VAAKHMGYNY AVFGFAPYSP FWREMRKIAT LELLSNRRLE MLKHVMVSEL NMVMRDLYNS WVQNRSRPVL VELNRWLEDL TLNMVVRMVA
201: GKRYFGASAS CDNDDEARRC QKAINQFFHL IGIFVVSDAL PFLRWFDVQG HERAMKKTAK ELDAILEGWL KEHREQRVDG EIKAEGEQDF IDIMLSLQKG
301: GHLSNFQYDS DTSIKSTCLA LILGGSDTTA GTVTWAISLL LNNRQALKKA QEELDLNVGM ERQVEESDIR NLAYVQAIIK ETLRLYPAGP LLGPREAQED
401: CNVAGYHVPA GTRLVVNLWK IHRDPRVWQE PSAFRPERFL TSDAVDVRGQ NFELIPFGSG RRSCPGMSFA LQVLHLTLAR LLHAFEFATP SDQPVDMTES
501: PGLTIPKATP LEVLLTPRLP AKLYAC
001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
Arabidopsis Description
CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.