Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000214.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31950.1 | Bra000214.1-P | AT2G41100.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23316 | Canola | extracellular, golgi | 98.29 | 98.66 |
| CDY53704 | Canola | endoplasmic reticulum, extracellular | 97.9 | 98.28 |
| AT4G31940.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 87.81 | 87.98 |
| AT4G31970.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 84.0 | 84.32 |
| AT4G31950.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 81.52 | 83.59 |
| VIT_18s0001g11400.t01 | Wine grape | endoplasmic reticulum, golgi | 68.95 | 68.69 |
| KRH61225 | Soybean | nucleus | 68.76 | 68.63 |
| PGSC0003DMT400039871 | Potato | cytosol | 59.81 | 67.38 |
| Solyc12g088970.1.1 | Tomato | endoplasmic reticulum | 64.95 | 64.71 |
| KRH51926 | Soybean | endoplasmic reticulum | 31.81 | 47.71 |
| Bra013227.1-P | Field mustard | endoplasmic reticulum | 37.71 | 44.2 |
| Bra038167.1-P | Field mustard | endoplasmic reticulum, plastid | 39.24 | 41.87 |
| Bra024133.1-P | Field mustard | plastid | 39.43 | 41.65 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EnsemblPlantsGene:Bra010214 | EnsemblPlants:Bra010214.1 | EnsemblPlants:Bra010214.1-P | InterPro:Cyt_P450 |
| InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 |
| GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | UniProt:M4D165 | PFAM:PF00067 |
| PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF111 | SUPFAM:SSF48264 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002546B39 | SEG:seg | : | : |
Description
AT4G31940 (E=2e-259) CYP82C4 | CYP82C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding
Coordinates
chrA08:-:13219311..13221588
Molecular Weight (calculated)
58987.7 Da
IEP (calculated)
7.915
GRAVY (calculated)
-0.148
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAFLFSLLS PLLVFVLIAL FKKTKKPKHA KAPEPSGAWP IIGHLHLLGG KEQLLYRTLG EMANRYGPAM SLRLGSNEAF VVSSFEVAKE CFTVNDKALA
101: SRPMTAAAKH MGYNYAVFGF APYSSFWREM RKIATVELLS NRRLQMLKHV RVSEISMGVK DLYSLWVKKG GSEPIIVDLK RWLEDMTLNM IVRMVAGKRY
201: FGGGSTTPED TEEARQCQKA ITKFFHLIGI FTMSDAFPTL GWFDLQGHEK EMKKTGSELD VILERWIENH RQQRKVSGNK ENDSDFIDVM LSLAEQGKLS
301: HLQYDANTSI KSTCLALILG GSDTTASTLT WAIALLLNNK DMLKKAQDEI DLQVGTDRNV EDSDIENLVY LQAIIKETLR LYPAGPLLGP REAMEDCTVA
401: GYHVACGTRL IVNVWKIQRD PKVWVEPNEF RPERFLTGEA KEFDVRGQNF ELIPFGSGRR SCPGSSLAMQ VLHLGLARFL HSFDVKTDLD VAVDMSESPG
501: LTIPKATPLE VMISPRLEKH LHLFA
101: SRPMTAAAKH MGYNYAVFGF APYSSFWREM RKIATVELLS NRRLQMLKHV RVSEISMGVK DLYSLWVKKG GSEPIIVDLK RWLEDMTLNM IVRMVAGKRY
201: FGGGSTTPED TEEARQCQKA ITKFFHLIGI FTMSDAFPTL GWFDLQGHEK EMKKTGSELD VILERWIENH RQQRKVSGNK ENDSDFIDVM LSLAEQGKLS
301: HLQYDANTSI KSTCLALILG GSDTTASTLT WAIALLLNNK DMLKKAQDEI DLQVGTDRNV EDSDIENLVY LQAIIKETLR LYPAGPLLGP REAMEDCTVA
401: GYHVACGTRL IVNVWKIQRD PKVWVEPNEF RPERFLTGEA KEFDVRGQNF ELIPFGSGRR SCPGSSLAMQ VLHLGLARFL HSFDVKTDLD VAVDMSESPG
501: LTIPKATPLE VMISPRLEKH LHLFA
001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV
Arabidopsis Description
CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.