Factsheet for VIT_05s0020g03870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22750.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT3G22750.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34236	Canola	cytosol	71.61	80.0
GSMUA_Achr6P24390_001	Banana	cytosol	70.33	77.9
Solyc10g045270.1.1	Tomato	cytosol	48.59	77.55
KRH77828	Soybean	cytosol	75.96	76.74
KRH27659	Soybean	cytosol	75.45	76.62
GSMUA_Achr7P01410_001	Banana	cytosol	68.03	75.35
Bra023811.1-P	Field mustard	cytosol	73.15	75.26
CDY55265	Canola	cytosol	73.15	75.26
AT3G22750.1	Thale cress	cytosol	72.63	75.13
Bra033921.1-P	Field mustard	cytosol	71.87	74.34
CDY10304	Canola	cytosol	71.87	74.34
CDY10667	Canola	cytosol	71.87	74.34
AT4G14780.1	Thale cress	cytosol	69.05	74.18
VIT_07s0151g00500.t01	Wine grape	cytosol	75.96	73.51
HORVU5Hr1G093370.1	Barley	cytosol	70.08	73.46
CDY08298	Canola	cytosol	68.29	73.35
TraesCS5D01G386800.1	Wheat	cytosol	69.82	73.19
TraesCS5A01G376700.1	Wheat	cytosol	69.82	73.19
CDY06483	Canola	cytosol	68.03	73.08
Bra037067.1-P	Field mustard	cytosol	68.03	73.08
TraesCS5B01G380400.1	Wheat	cytosol	69.57	72.92
PGSC0003DMT400082063	Potato	cytosol	73.66	72.91
Solyc09g082470.2.1	Tomato	cytosol	73.66	72.91
KXG37965	Sorghum	cytosol	70.33	72.75
Zm00001d033275_P007	Maize	plasma membrane	70.08	72.49
Os03t0638800-01	Rice	plasma membrane	69.82	72.03
VIT_14s0066g01400.t01	Wine grape	cytosol	65.73	71.39
KXG23933	Sorghum	cytosol	67.26	71.08
GSMUA_Achr4P21230_001	Banana	cytosol	67.01	70.62
Zm00001d031014_P001	Maize	cytosol, plasma membrane	66.75	70.54
PGSC0003DMT400097225	Potato	cytosol	58.31	68.88
KRG91343	Soybean	cytosol	65.98	67.72
VIT_17s0000g08140.t01	Wine grape	cytosol	65.73	67.45
KRH35488	Soybean	plastid	20.2	65.29
VIT_00s0515g00050.t01	Wine grape	extracellular, plasma membrane	8.7	28.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259653	wikigene:100259653	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CCB50449
ProteinID:CCB50449.1	UniProt:F6HDS8	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100259653	wikigene:LOC100259653	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF6	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00019832BC	ArrayExpress:VIT_05s0020g03870
EnsemblPlantsGene:VIT_05s0020g03870	EnsemblPlants:VIT_05s0020g03870.t01	unigene:Vvi.19123	RefSeq:XP_002283073	RefSeq:XP_002283073.1	SEG:seg

Description

No Description!

Coordinates

chr5:-:5521770..5528006

Molecular Weight (calculated)

43741.7 Da

IEP (calculated)

7.995

GRAVY (calculated)

-0.351

Length

391 amino acids

Sequence
(BLAST)

001: MMDLKTTEEI GGAMIAEKSD CKESSTGSKV KGTGSLSNKD KIFRADKIDL KSLDIQLEKH LSRVWSRSID SQRPKEEWEI DLSKLDIKHV VAHGTYGTVY
101: QGTYDNQDVA VKVLDWGEDG IPTTAETAAL RASFRQEVAV WHKLDNPNVT KFIGASMGTS NLKVPTQSLP LAGDRFPTRA CCVVVEYLPG GTLKQYLIRN
201: RRKKLAFKIV IQLALDLSRG LSYLHSKKIV HRDVKSENML LDAQRTLKIA DFGVARVEAQ NLREMTGETG TLGYMAPEVL DGKPYNRRCD VYSFGICLWE
301: IYCCDMPYPD LSFAEVSSAV VRQNLRPEIP RCCPSSLANI MRKCWDANAE KRPDMNEVVK MLEAIDTSRG GGMIPEDQTP VCFCFSNVRG P

Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)

001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP

Arabidopsis Description

Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.