CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22750.1	CDX73678	AT3G51920.1	17360592
AT3G22750.1	CDX95314	AT3G51920.1	17360592
AT3G22750.1	CDY23174	AT3G51920.1	17360592
AT3G22750.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033921.1-P	Field mustard	cytosol	100.0	100.0
CDY10667	Canola	cytosol	100.0	100.0
CDY34236	Canola	cytosol	88.62	95.71
CDY55265	Canola	cytosol	93.92	93.42
AT3G22750.1	Thale cress	cytosol	92.59	92.59
CDY08298	Canola	cytosol	76.19	79.12
CDY06483	Canola	cytosol	75.13	78.02
Solyc10g045270.1.1	Tomato	cytosol	49.47	76.33
GSMUA_Achr6P24390_001	Banana	cytosol	70.11	75.07
KRH27659	Soybean	cytosol	76.45	75.06
KRH77828	Soybean	cytosol	76.72	74.94
GSMUA_Achr7P01410_001	Banana	cytosol	69.05	73.94
HORVU5Hr1G093370.1	Barley	cytosol	71.69	72.65
Os03t0638800-01	Rice	plasma membrane	72.22	72.03
VIT_05s0020g03870.t01	Wine grape	cytosol	74.34	71.87
TraesCS5D01G386800.1	Wheat	cytosol	70.9	71.85
TraesCS5B01G380400.1	Wheat	cytosol	70.9	71.85
TraesCS5A01G376700.1	Wheat	cytosol	70.9	71.85
KXG23933	Sorghum	cytosol	70.11	71.62
Zm00001d031014_P001	Maize	cytosol, plasma membrane	70.11	71.62
Zm00001d033275_P007	Maize	plasma membrane	71.16	71.16
KXG37965	Sorghum	cytosol	71.16	71.16
PGSC0003DMT400082063	Potato	cytosol	72.75	69.62
Solyc09g082470.2.1	Tomato	cytosol	72.75	69.62
GSMUA_Achr4P21230_001	Banana	cytosol	67.72	69.0
PGSC0003DMT400097225	Potato	cytosol	58.47	66.77
KRG91343	Soybean	cytosol	64.81	64.3
CDY49058	Canola	nucleus	65.08	63.73
CDY68821	Canola	cytosol	64.55	63.54
CDY21438	Canola	cytosol	64.55	63.21
CDY37517	Canola	cytosol	64.55	63.21
KRH35488	Soybean	plastid	20.11	62.81
CDY53719	Canola	cytosol	61.9	62.57
CDY56447	Canola	cytosol	63.76	62.27
CDX93916	Canola	cytosol	61.9	61.74
CDX99149	Canola	cytosol, plasma membrane, plastid	12.96	57.65
CDX76692	Canola	cytosol	62.96	33.06
CDY65655	Canola	cytosol	13.76	30.95
CDX93917	Canola	cytosol	0.79	0.9

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EnsemblPlants:CDY10304	ProteinID:CDY10304	ProteinID:CDY10304.1
ProteinID:CDY10667.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00032154001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44084	PANTHER:PTHR44084:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002547438	GO:V9LY60	UniProt:V9LY60	:	:

Description

BnaC05g29750DBnaA05g16950D protein [Source:UniProtKB/TrEMBL;Acc:V9LY60]

Coordinates

chrLK032002:-:266692..269586

Molecular Weight (calculated)

42573.3 Da

IEP (calculated)

8.328

GRAVY (calculated)

-0.427

Length

378 amino acids

Sequence
(BLAST)

001: METPNEIKAS PGNNLRNRGA VGNDSKKDMI FRADRIDLKN LDIQLEKHLS RVWSRNIEKN PKPKEEWEIE LAKLEMSNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVGVW HKLNHPNVTK FVGASMGTTN LKIPSSAEME NSLPQRACCV VVEYLPGGTL KQYLFRNRRR KLAIRVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CAMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTSLSNIMKR CWDANPVKRP EMEEVVKMLE GVDTSKGGGM IPEDQRPGCF CFVSGRGP

Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)

001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP

Arabidopsis Description

Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.