CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22750.1	CDX73678	AT3G51920.1	17360592
AT3G22750.1	CDX95314	AT3G51920.1	17360592
AT3G22750.1	CDY23174	AT3G51920.1	17360592
AT3G22750.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023811.1-P	Field mustard	cytosol	100.0	100.0
CDY34236	Canola	cytosol	92.11	100.0
CDY10304	Canola	cytosol	93.42	93.92
CDY10667	Canola	cytosol	93.42	93.92
AT3G22750.1	Thale cress	cytosol	93.16	93.65
CDY08298	Canola	cytosol	76.05	79.4
CDY06483	Canola	cytosol	75.53	78.85
Solyc10g045270.1.1	Tomato	cytosol	50.26	77.96
KRH27659	Soybean	cytosol	77.63	76.62
GSMUA_Achr6P24390_001	Banana	cytosol	71.05	76.49
KRH77828	Soybean	cytosol	77.89	76.49
GSMUA_Achr7P01410_001	Banana	cytosol	70.53	75.92
HORVU5Hr1G093370.1	Barley	cytosol	72.63	73.99
Os03t0638800-01	Rice	plasma membrane	73.16	73.35
TraesCS5A01G376700.1	Wheat	cytosol	71.84	73.19
TraesCS5B01G380400.1	Wheat	cytosol	71.84	73.19
TraesCS5D01G386800.1	Wheat	cytosol	71.84	73.19
VIT_05s0020g03870.t01	Wine grape	cytosol	75.26	73.15
Zm00001d031014_P001	Maize	cytosol, plasma membrane	70.79	72.7
Zm00001d033275_P007	Maize	plasma membrane	72.11	72.49
KXG37965	Sorghum	cytosol	72.11	72.49
KXG23933	Sorghum	cytosol	70.53	72.43
PGSC0003DMT400082063	Potato	cytosol	73.95	71.14
Solyc09g082470.2.1	Tomato	cytosol	73.95	71.14
GSMUA_Achr4P21230_001	Banana	cytosol	68.68	70.35
PGSC0003DMT400097225	Potato	cytosol	59.74	68.58
KRG91343	Soybean	cytosol	65.53	65.35
CDY68821	Canola	cytosol	65.53	64.84
CDY49058	Canola	nucleus	65.79	64.77
CDY21438	Canola	cytosol	65.53	64.51
CDY37517	Canola	cytosol	65.26	64.25
CDY53719	Canola	cytosol	62.37	63.37
CDY56447	Canola	cytosol	64.21	63.05
KRH35488	Soybean	plastid	20.0	62.81
CDX93916	Canola	cytosol	62.37	62.53
CDX99149	Canola	cytosol, plasma membrane, plastid	13.16	58.82
CDX76692	Canola	cytosol	63.42	33.47
CDY65655	Canola	cytosol	13.42	30.36
CDX93917	Canola	cytosol	0.79	0.9

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078J0M8	UniProt:A0A078J0M8	EnsemblPlants:CDY55265
ProteinID:CDY55265	ProteinID:CDY55265.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00016617001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544174	SEG:seg	:	:

Description

BnaCnng28670DBnaCnng28670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0M8]

Coordinates

chrLK033389:-:35698..37533

Molecular Weight (calculated)

42766.3 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.462

Length

380 amino acids

Sequence
(BLAST)

001: MEPTNETEAT PENNLRSRGG AAVGNNSKKD MIFRADKIDL KNLDIQLEKH LSRVWSRNIE KNPKPKEEWE IDLAKLEMRN VIARGAYGIV YKGIYDGQDV
101: AVKVLDWGED GYATAAETSA LRASFRQEVA VWHKLDHPNV TKFVGASMGT TNLKIPSSAE NENSLPQRAC CVVVEYLPGG TLKQFLFRNR RRKLAFKVVV
201: QLALDLSRGL SYLHSERIVH RDVKTENMLL DYQRNLKIAD FGVARVEAQN PKDMTGETGT LGYMAPEVLD GKPYNRRCDV YSFGICLWEI YCCDMPYPDL
301: SFADVSSAVV RQNLRPDIPR CCPTSLSSIM KKCWEANPEK RPEMEEVVKM LEGVDTSKGG GMIPEDQRPG CFCFVSGRGP

Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)

001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP

Arabidopsis Description

Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.