Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g045270.1.1 | Tomato | cytosol | 55.89 | 75.51 |
| PGSC0003DMT400082063 | Potato | cytosol | 76.44 | 64.05 |
| CDY34236 | Canola | cytosol | 66.77 | 63.14 |
| KRH35488 | Soybean | plastid | 22.96 | 62.81 |
| GSMUA_Achr6P24390_001 | Banana | cytosol | 66.47 | 62.32 |
| KRH77828 | Soybean | cytosol | 71.9 | 61.5 |
| KRH27659 | Soybean | cytosol | 71.0 | 61.04 |
| Bra023811.1-P | Field mustard | cytosol | 68.58 | 59.74 |
| CDY55265 | Canola | cytosol | 68.58 | 59.74 |
| GSMUA_Achr7P01410_001 | Banana | cytosol | 63.44 | 59.49 |
| AT3G22750.1 | Thale cress | cytosol | 66.77 | 58.47 |
| CDY10667 | Canola | cytosol | 66.77 | 58.47 |
| CDY10304 | Canola | cytosol | 66.77 | 58.47 |
| Bra033921.1-P | Field mustard | cytosol | 66.77 | 58.47 |
| VIT_05s0020g03870.t01 | Wine grape | cytosol | 68.88 | 58.31 |
| CDY08298 | Canola | cytosol | 64.05 | 58.24 |
| CDY06483 | Canola | cytosol | 63.75 | 57.97 |
| Bra037067.1-P | Field mustard | cytosol | 63.75 | 57.97 |
| Os03t0638800-01 | Rice | plasma membrane | 65.56 | 57.26 |
| AT4G14780.1 | Thale cress | cytosol | 62.84 | 57.14 |
| HORVU5Hr1G093370.1 | Barley | cytosol | 64.35 | 57.1 |
| Zm00001d033275_P007 | Maize | plasma membrane | 64.95 | 56.88 |
| KXG37965 | Sorghum | cytosol | 64.65 | 56.61 |
| TraesCS5A01G376700.1 | Wheat | cytosol | 63.75 | 56.57 |
| TraesCS5B01G380400.1 | Wheat | cytosol | 63.75 | 56.57 |
| TraesCS5D01G386800.1 | Wheat | cytosol | 63.75 | 56.57 |
| KXG23933 | Sorghum | cytosol | 62.54 | 55.95 |
| Zm00001d031014_P001 | Maize | cytosol, plasma membrane | 62.24 | 55.68 |
| KRG91343 | Soybean | cytosol | 63.14 | 54.86 |
| GSMUA_Achr4P21230_001 | Banana | cytosol | 61.03 | 54.45 |
| PGSC0003DMT400072132 | Potato | cytosol | 59.21 | 53.26 |
| PGSC0003DMT400069449 | Potato | cytosol | 61.33 | 51.79 |
| PGSC0003DMT400063241 | Potato | cytosol | 60.73 | 51.41 |
| PGSC0003DMT400079590 | Potato | cytosol | 21.75 | 39.13 |
| PGSC0003DMT400051283 | Potato | cytosol | 39.27 | 37.14 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | UniProt:M1E060 | PFAM:PF00069 | PFAM:PF07714 | EnsemblPlantsGene:PGSC0003DMG400046796 | PGSC:PGSC0003DMG400046796 |
| EnsemblPlants:PGSC0003DMT400097225 | PIRSF:PIRSF000615 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR44084 | PANTHER:PTHR44084:SF6 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000296831E |
| SEG:seg | : | : | : | : | : |
Description
Protein kinase atmrk1 [Source:PGSC_GENE;Acc:PGSC0003DMG400046796]
Coordinates
chr10:+:33569084..33572658
Molecular Weight (calculated)
37095.6 Da
IEP (calculated)
7.078
GRAVY (calculated)
-0.437
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSTVEDGD MSKLKGLANL DEKSMEKNIS SSDMIIRADK IDLKSLDVQL EKHLSRVWST NVENQNQRPR EVWEIDPSKL EIRYLVAQGT YAKLLDWGED
101: GMTTAAETAA LRASFQQEVT VWQKLDHPNV TKFVGASMGT SNRKIPSKNP FEGYTTLPSR ACCVLVEFLH GGTLKKYLYK NRKKKLPFKI VIQLALDLSR
201: GLSYLHSEKI VHRDVKAENM LLDTDRTLKI ADFGVARVEA QNPQDMTGET GTLGYVAPEV FDGNLRPEIS RCCPSSLSNV MKKCWDGHSE KRPEMEEVVR
301: LLEAIDTSKG GGMIPEDVAG SCICFRPIRG P
101: GMTTAAETAA LRASFQQEVT VWQKLDHPNV TKFVGASMGT SNRKIPSKNP FEGYTTLPSR ACCVLVEFLH GGTLKKYLYK NRKKKLPFKI VIQLALDLSR
201: GLSYLHSEKI VHRDVKAENM LLDTDRTLKI ADFGVARVEA QNPQDMTGET GTLGYVAPEV FDGNLRPEIS RCCPSSLSNV MKKCWDGHSE KRPEMEEVVR
301: LLEAIDTSKG GGMIPEDVAG SCICFRPIRG P
001: MKEKAESGGG VGYVRADQID LKSLDEQLQR HLSKAWTMEK RKSLSDGEDN VNNTRHNQNN FGHRQLVFQR PLLGGGYSNN NNSSKNDIIR STEVEKSRRE
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P
Arabidopsis Description
AT3g01490/F4P13_4 [Source:UniProtKB/TrEMBL;Acc:Q9SSA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.