Factsheet for PGSC0003DMT400051283

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g026210.2.1	Tomato	cytosol	33.43	84.17
Solyc04g026230.1.1	Tomato	cytosol	27.14	77.87
PGSC0003DMT400079590	Potato	cytosol	31.14	59.24
PGSC0003DMT400072132	Potato	cytosol	48.57	46.2
PGSC0003DMT400069449	Potato	cytosol	50.0	44.64
PGSC0003DMT400063241	Potato	cytosol	49.71	44.5
PGSC0003DMT400082063	Potato	cytosol	47.43	42.03
PGSC0003DMT400097225	Potato	cytosol	37.14	39.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BRJ7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400019920	PGSC:PGSC0003DMG400019920	EnsemblPlants:PGSC0003DMT400051283
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029581AA	:

Description

Protein kinase atmrk1 [Source:PGSC_GENE;Acc:PGSC0003DMG400019920]

Coordinates

chr4:+:19952796..19954679

Molecular Weight (calculated)

39750.3 Da

IEP (calculated)

8.898

GRAVY (calculated)

-0.320

Length

350 amino acids

Sequence
(BLAST)

001: MDEQLERHLD KLFSKGCDES KKLEVTKKQE WELDPTKLKV NVNNLIAEGA YGSVYKGVYN GQQVAVKILD LSNEKRRDVL TNAFTQEVSI WYNLHHANIA
101: KLIGASKRLP QLIIKPESTS GKPWLKRWIN ELTNRTPWSR YRSLEKQPSL EYGIVVEYVP GGTLRSHLLK NHIKKLPLNS VIQLALDVAR GLSYLHSKKI
201: VHRDVKTSNL VMDKDGRVKI IDFGVSRIEA SCPLDMTAQI GTIGYMAPEV LIGLPYDHKC DVYSFGICLW EIYCCSIPYN GKIPSSHTSP CIYKSLRPEI
301: PNKCPSVVAN IMKQCWHADP KERPEMKEVV LMLEAIDTSQ VAEKGCFGFH

Best Arabidopsis Sequence Match ( AT3G01490.1 )
(BLAST)

001: MKEKAESGGG VGYVRADQID LKSLDEQLQR HLSKAWTMEK RKSLSDGEDN VNNTRHNQNN FGHRQLVFQR PLLGGGYSNN NNSSKNDIIR STEVEKSRRE
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P

Arabidopsis Description

AT3g01490/F4P13_4 [Source:UniProtKB/TrEMBL;Acc:Q9SSA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.