Factsheet for PGSC0003DMT400069449

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071410.2.1	Tomato	cytosol	99.23	98.73
GSMUA_Achr2P14410_001	Banana	cytosol	35.46	90.26
PGSC0003DMT400063241	Potato	cytosol	89.03	89.26
VIT_17s0000g08140.t01	Wine grape	cytosol	84.95	87.4
KRH63524	Soybean	cytosol	81.12	82.38
KRH54415	Soybean	cytosol	81.12	82.38
AT5G50000.1	Thale cress	cytosol	80.87	82.34
Bra000605.1-P	Field mustard	cytosol	80.61	82.29
CDY68821	Canola	cytosol	80.61	82.29
EES19998	Sorghum	cytosol	79.34	82.06
CDY21438	Canola	cytosol	80.36	81.61
HORVU1Hr1G091230.1	Barley	cytosol	75.26	80.6
Os05t0577700-01	Rice	plasma membrane	78.32	80.58
KRH57054	Soybean	nucleus	80.36	80.56
PGSC0003DMT400072132	Potato	cytosol	75.51	80.43
EES01155	Sorghum	cytosol	78.57	80.42
KRH03312	Soybean	nucleus	80.1	80.1
TraesCS1B01G446500.1	Wheat	cytosol	75.51	79.57
GSMUA_Achr4P24420_001	Banana	cytosol	79.34	79.34
TraesCS3D01G222800.1	Wheat	cytosol	77.55	78.96
TraesCS3B01G259800.1	Wheat	cytosol	77.55	78.96
TraesCS3A01G230500.1	Wheat	cytosol	77.3	78.5
TraesCS1D01G423800.1	Wheat	cytosol	74.49	78.07
TraesCS1A01G416200.1	Wheat	cytosol	74.49	77.45
Os01t0641000-01	Rice	cytosol, plasma membrane	76.53	77.32
PGSC0003DMT400082063	Potato	cytosol	64.8	64.3
PGSC0003DMT400097225	Potato	cytosol	51.79	61.33
HORVU3Hr1G057440.1	Barley	cytosol	77.55	60.92
HORVU3Hr1G049370.1	Barley	vacuole	22.96	56.6
PGSC0003DMT400079590	Potato	cytosol	24.74	52.72
PGSC0003DMT400051283	Potato	cytosol	44.64	50.0
Zm00001d017226_P003	Maize	plasma membrane	19.9	26.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	MapMan:26.2.1.4	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CKG3	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400026997	PGSC:PGSC0003DMG400026997
EnsemblPlants:PGSC0003DMT400069449	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084
PANTHER:PTHR44084:SF5	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029547DA	SEG:seg	:	:	:	:

Description

Protein kinase atmrk1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026997]

Coordinates

chr6:-:52259766..52264521

Molecular Weight (calculated)

43878.6 Da

IEP (calculated)

7.875

GRAVY (calculated)

-0.402

Length

392 amino acids

Sequence
(BLAST)

001: MEKGSDGFVR ADQIDLKSLD EQLERHLIRA RTMDKDKNKK KPQDDSSINY NISTATVANH PTTPNPNLSL FSSSVPRQRY EWEIDPSKLI IKTVLARGTF
101: GTVHRGIYDG QDVAVKLLDW GEEGHRTEAE IASLRAAFTQ EVSVWHKLDH PNVTKFIGAT MGASGLNIQT ENGHIGMPSN ICCVVVEYLP GGALKSYLIK
201: NRRKKLAFKV VVQIALDLAR GLSYLHTQKI VHRDVKTENM LLDKTRTVKI ADFGVARVEA SNPNDMTGET GTLGYMAPEV LNGNPYNRKC DVYSFGICLW
301: EIYCCDMPYP DLSFSEVTSA VVRQNLRPEI PRCCPSSLAN VMKRCWDANP DKRPEMDEVV SMIEAIDTSK GGGMIPVDQQ QGCFCFRKYR GP

Best Arabidopsis Sequence Match ( AT5G50000.1 )
(BLAST)

001: MKEGKDGFVR ADQIDLKSLD EQLERHLSRA LTLEKNKKKD EEDTTAVAIG GSASSSPVTL NGGGFVGKRK QRLEWEIDPS KLIIKTVLAR GTFGTVHRGI
101: YDGQDVAVKL LDWGEEGHRS EAEIVSLRAD FAQEVAVWHK LDHPNVTKFI GATMGASGLQ LQTESGPLAM PNNICCVVVE YLPGGALKSY LIKNRRRKLT
201: FKIVVQLALD LARGLSYLHS QKIVHRDVKT ENMLLDKTRT VKIADFGVAR VEASNPNDMT GETGTLGYMA PEVLNGNPYN RKCDVYSFGI CLWEIYCCDM
301: PYPDLTFSEV TSAVVRQNLR PDIPRCCPSA LAAVMKRCWD ANPDKRPEMD EVVPMLESID TTKGGGMIPN DQQQGCLCFR RKRGP

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.