Factsheet for VIT_17s0000g08140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0066g01400.t01	Wine grape	cytosol	83.99	88.89
GSMUA_Achr2P14410_001	Banana	cytosol	35.43	87.66
PGSC0003DMT400069449	Potato	cytosol	87.4	84.95
Solyc06g071410.2.1	Tomato	cytosol	87.66	84.77
PGSC0003DMT400063241	Potato	cytosol	86.35	84.14
Solyc03g114210.2.1	Tomato	endoplasmic reticulum	86.35	84.14
KRH57054	Soybean	nucleus	85.3	83.12
KRH63524	Soybean	cytosol	83.73	82.64
KRH03312	Soybean	nucleus	84.78	82.4
KRH54415	Soybean	cytosol	83.46	82.38
Bra000605.1-P	Field mustard	cytosol	81.89	81.25
CDY68821	Canola	cytosol	81.89	81.25
EES19998	Sorghum	cytosol	80.31	80.74
CDY21438	Canola	cytosol	81.63	80.57
AT5G50000.1	Thale cress	cytosol	81.36	80.52
HORVU1Hr1G091230.1	Barley	cytosol	76.9	80.05
Os05t0577700-01	Rice	plasma membrane	79.53	79.53
EES01155	Sorghum	cytosol	79.79	79.37
TraesCS1B01G446500.1	Wheat	cytosol	77.17	79.03
TraesCS3A01G230500.1	Wheat	cytosol	80.05	79.02
TraesCS3B01G259800.1	Wheat	cytosol	79.79	78.96
TraesCS3D01G222800.1	Wheat	cytosol	79.79	78.96
GSMUA_Achr4P24420_001	Banana	cytosol	80.05	77.81
TraesCS1D01G423800.1	Wheat	cytosol	76.12	77.54
Os01t0641000-01	Rice	cytosol, plasma membrane	78.74	77.32
TraesCS1A01G416200.1	Wheat	cytosol	76.38	77.19
VIT_05s0020g03870.t01	Wine grape	cytosol	67.45	65.73
VIT_07s0151g00500.t01	Wine grape	cytosol	68.5	64.6
HORVU3Hr1G057440.1	Barley	cytosol	79.79	60.92
HORVU3Hr1G049370.1	Barley	vacuole	22.57	54.09
VIT_00s0515g00050.t01	Wine grape	extracellular, plasma membrane	9.45	30.51
Zm00001d017226_P003	Maize	plasma membrane	19.95	25.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250035	wikigene:100250035	MapMan:18.4.1.30	MapMan:26.2.1.4	Gene3D:3.30.200.20
EMBL:AM431105	ProteinID:CAN64754	ProteinID:CAN64754.1	ProteinID:CCB42991	ProteinID:CCB42991.1	UniProt:F6GSR8
EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250035	wikigene:LOC100250035	PFAM:PF07714
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF5
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC63093
UniParc:UPI00019852DA	ArrayExpress:VIT_17s0000g08140	EnsemblPlantsGene:VIT_17s0000g08140	EnsemblPlants:VIT_17s0000g08140.t01	unigene:Vvi.2216	RefSeq:XP_002283021
RefSeq:XP_002283021.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:-:9166532..9172436

Molecular Weight (calculated)

42333.7 Da

IEP (calculated)

6.909

GRAVY (calculated)

-0.336

Length

381 amino acids

Sequence
(BLAST)

001: MKESSDGFVR ADQIDLKSLD EQLEKHLNRV WTMDKNKKKE DDSSSAAAAI PTLAPSTTAS TTAPTTARQD WEIDPSKLII KTVIARGTFG TVHRGVYDGQ
101: DVAVKLLDWG EEGHRTEAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGATM GSAELNIQTE NGHIGMPSNI CCVVVEYLPG GALKSYLIKN RRRKLAFKVV
201: IQLALDLARG LSYLHSQKIV HRDVKTENML LDKTRTVKIA DFGVARVEAS NPNDMTGETG TLGYMAPEVL NGSPYNRKCD VYSFGICLWE IYCCDMPYPD
301: LSFSEVTSAV VRQNLRPEIP RCCPNSLANV MKRCWDANPD KRPEMDEVVA MIEAIDTSRG GGMLPVDQPQ GCFCFRKYRG P

Best Arabidopsis Sequence Match ( AT5G50000.1 )
(BLAST)

001: MKEGKDGFVR ADQIDLKSLD EQLERHLSRA LTLEKNKKKD EEDTTAVAIG GSASSSPVTL NGGGFVGKRK QRLEWEIDPS KLIIKTVLAR GTFGTVHRGI
101: YDGQDVAVKL LDWGEEGHRS EAEIVSLRAD FAQEVAVWHK LDHPNVTKFI GATMGASGLQ LQTESGPLAM PNNICCVVVE YLPGGALKSY LIKNRRRKLT
201: FKIVVQLALD LARGLSYLHS QKIVHRDVKT ENMLLDKTRT VKIADFGVAR VEASNPNDMT GETGTLGYMA PEVLNGNPYN RKCDVYSFGI CLWEIYCCDM
301: PYPDLTFSEV TSAVVRQNLR PDIPRCCPSA LAAVMKRCWD ANPDKRPEMD EVVPMLESID TTKGGGMIPN DQQQGCLCFR RKRGP

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.