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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01155 Sorghum cytosol 89.18 90.34
TraesCS3A01G230500.1 Wheat cytosol 88.92 89.38
TraesCS3B01G259800.1 Wheat cytosol 88.66 89.35
TraesCS3D01G222800.1 Wheat cytosol 88.66 89.35
GSMUA_Achr2P14410_001 Banana cytosol 35.05 88.31
Zm00001d044091_P002 Maize cytosol 87.11 85.57
VIT_14s0066g01400.t01 Wine grape cytosol 77.84 83.89
Os05t0577700-01 Rice plasma membrane 81.7 83.2
KRH20309 Soybean cytosol 76.55 81.15
KRG93329 Soybean cytosol 76.55 80.93
Zm00001d011458_P001 Maize cytosol 84.02 79.9
VIT_17s0000g08140.t01 Wine grape cytosol 77.32 78.74
Solyc12g062280.1.1 Tomato cytosol 72.16 77.35
PGSC0003DMT400063241 Potato cytosol 77.58 76.98
Solyc03g114210.2.1 Tomato endoplasmic reticulum 77.58 76.98
Solyc06g071410.2.1 Tomato cytosol 77.84 76.65
CDY68821 Canola cytosol 75.77 76.56
Bra000605.1-P Field mustard cytosol 75.77 76.56
PGSC0003DMT400069449 Potato cytosol 77.32 76.53
GSMUA_Achr4P24420_001 Banana cytosol 77.32 76.53
CDY21438 Canola cytosol 75.77 76.17
KRH63524 Soybean cytosol 75.52 75.91
KRH54415 Soybean cytosol 75.52 75.91
PGSC0003DMT400072132 Potato cytosol 71.91 75.82
CDY49058 Canola nucleus 75.26 75.65
AT5G50000.1 Thale cress cytosol 75.0 75.58
CDY37517 Canola cytosol 75.0 75.39
KRH57054 Soybean nucleus 75.77 75.19
KRH03312 Soybean nucleus 75.77 75.0
Bra039114.1-P Field mustard cytosol 75.0 71.32
AT3G01490.1 Thale cress cytosol 75.52 71.29
HORVU3Hr1G057440.1 Barley cytosol 87.89 68.34
Os03t0638800-01 Rice plasma membrane 65.98 67.55
Os12t0605900-01 Rice plasma membrane 54.64 53.0
Bra022140.1-P Field mustard cytosol, extracellular, plastid 7.99 51.67
Os03t0745700-00 Rice plasma membrane 52.58 50.12
CDX99149 Canola cytosol, plasma membrane, plastid 10.82 49.41
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.30MapMan:26.2.1.4Gene3D:3.30.200.20EntrezGene:4326554ProteinID:BAB92793.1
ProteinID:BAF05596.1ProteinID:BAS73367.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556
InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os01g0641000EnsemblPlants:Os01t0641000-01PFAM:PF07714PIRSF:PIRSF000654
PRINTS:PR00109ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44084PANTHER:PTHR44084:SF4InterPro:Prot_kinase_dom
UniProt:Q8LQ53SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI00000ABA16
RefSeq:XP_015622688.1SEG:seg::::
Description
Similar to Protein kinase. (Os01t0641000-01)
Coordinates
chr1:+:25757795..25762187
Molecular Weight (calculated)
42841.3 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.414
Length
388 amino acids
Sequence
(BLAST)
001: MRHPGAGGGS GDAGFVRADQ IDLKSLDEQL ERHLGRPAER AASQHGGSGS RRGESARLGL GEEPPQAPHH QRRREDWEID PAKLVIRGVI ARGTFGTVHR
101: GVYDGQDVAV KMLDWGEDGH RSEREISSLR AAFAQEVAVW HKLDHPNVTK FIGAIMGARD LNIQTEHGHF GMPSNICCVV VEYLAGGALK NFLIKNRRRK
201: LAYKVVVQLA LDLARGLSYL HSKKIVHRDV KTENMLLDKS RTVKIADFGV ARIEASNPSD MTGETGTLGY MAPEVLNGHP YNRKCDVYSF GICLWEIYCC
301: DMPYPDLSFS EVTSAVVRQN LRPEIPRCCP SSLANVMKRC WDANPDKRPA MAEVVSMLEA IDTSKGGGMI PTDQPQGCFS CFGRHRGP
Best Arabidopsis Sequence Match ( AT3G01490.1 )
(BLAST)
001: MKEKAESGGG VGYVRADQID LKSLDEQLQR HLSKAWTMEK RKSLSDGEDN VNNTRHNQNN FGHRQLVFQR PLLGGGYSNN NNSSKNDIIR STEVEKSRRE
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P
Arabidopsis Description
AT3g01490/F4P13_4 [Source:UniProtKB/TrEMBL;Acc:Q9SSA4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.