Factsheet for Os12t0605900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0638800-01	Rice	plasma membrane	60.0	63.32
TraesCS2D01G427800.1	Wheat	cytosol	46.25	55.39
Os01t0641000-01	Rice	cytosol, plasma membrane	53.0	54.64
Os05t0577700-01	Rice	plasma membrane	52.0	54.59
TraesCS2D01G360700.1	Wheat	cytosol	52.0	54.17
TraesCS2B01G381400.1	Wheat	cytosol	51.75	53.91
TraesCS2A01G430200.1	Wheat	cytosol	42.5	53.29
Os03t0745700-00	Rice	plasma membrane	49.5	48.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EntrezGene:4352742	ProteinID:ABA99834.1	EMBL:AK109696
ProteinID:BAF30246.1	ProteinID:BAT17988.1	ProteinID:EAZ21148.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os12g0605900	EnsemblPlants:Os12t0605900-01	PFAM:PF07714
PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF1
InterPro:Prot_kinase_dom	UniProt:Q2QMG1	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0000680C84	RefSeq:XP_015619431.1	SEG:seg	:	:	:

Description

rice microspore-preferred 3Similar to Kinase like protein. (Os12t0605900-01)

Coordinates

chr12:+:25583204..25586395

Molecular Weight (calculated)

44741.5 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.349

Length

400 amino acids

Sequence
(BLAST)

001: MASSCTMVPA DLVEEKAAAA AVEEDAGSYL RADQVDLMSL DFEIEERMAD RFRKLNSGGV ERGDEGPKAA WEIDLSKLEI GHVVEHGDHG TLFRGKYYSQ
101: DVAVKLLDWG AEGDSSEDQI AHFRTSLKEV VAVWHEFNHP NITKFIGASM GTTNLNIPKD IPDHSSRKGA RTDLPDRACC VVVEYLTGGT LKQHLIKHYR
201: KNKKLLYEEV VRLALDLARG LSFLHSKKIV HRDVKSENML LDPQLNLKIA DFGVARLVEA QDPKDLTRTT GTLGYMAPEV LDGKPYNRKC DVYSFGICLW
301: ETYCCDMPYG PYSDLSFADF SSFVVHKNLR PEIPDCCPSA MASIMRRCWD ANPEVRPEME EVVRLLESLD TSNGGGMLLE KKKKKHPGGG CFCFFVPRAA

Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)

001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP

Arabidopsis Description

Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.