CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

nucleus: 21132161
extracellular: 25724908

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 25724908 doi

VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith

From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03312	Soybean	nucleus	97.44	97.19
GSMUA_Achr2P14410_001	Banana	cytosol	35.29	89.61
VIT_17s0000g08140.t01	Wine grape	cytosol	83.12	85.3
KRH63524	Soybean	cytosol	83.89	84.97
KRH54415	Soybean	cytosol	83.63	84.72
KRG93329	Soybean	cytosol	79.03	84.2
KRH20309	Soybean	cytosol	78.77	84.15
Solyc03g114210.2.1	Tomato	endoplasmic reticulum	80.82	80.82
PGSC0003DMT400063241	Potato	cytosol	80.82	80.82
Solyc06g071410.2.1	Tomato	cytosol	81.07	80.46
PGSC0003DMT400069449	Potato	cytosol	80.56	80.36
Bra000605.1-P	Field mustard	cytosol	78.77	80.21
CDY68821	Canola	cytosol	78.77	80.21
CDY21438	Canola	cytosol	78.77	79.79
AT5G50000.1	Thale cress	cytosol	78.52	79.74
EES19998	Sorghum	cytosol	76.47	78.89
Os05t0577700-01	Rice	plasma membrane	76.21	78.22
HORVU1Hr1G091230.1	Barley	cytosol	73.15	78.14
GSMUA_Achr4P24420_001	Banana	cytosol	78.01	77.81
EES01155	Sorghum	cytosol	75.96	77.55
TraesCS1B01G446500.1	Wheat	cytosol	73.66	77.42
TraesCS3A01G230500.1	Wheat	cytosol	75.19	76.17
TraesCS3D01G222800.1	Wheat	cytosol	74.94	76.1
TraesCS3B01G259800.1	Wheat	cytosol	74.94	76.1
TraesCS1D01G423800.1	Wheat	cytosol	72.63	75.94
TraesCS1A01G416200.1	Wheat	cytosol	73.15	75.86
Os01t0641000-01	Rice	cytosol, plasma membrane	75.19	75.77
KRH77828	Soybean	cytosol	64.45	65.12
KRH27659	Soybean	cytosol	63.94	64.94
KRH35488	Soybean	plastid	19.18	61.98
HORVU3Hr1G057440.1	Barley	cytosol	74.94	58.72
KRG91343	Soybean	cytosol	57.03	58.53
HORVU3Hr1G049370.1	Barley	vacuole	21.74	53.46
Zm00001d017226_P003	Maize	plasma membrane	19.18	25.25

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100807921	MapMan:18.4.1.30	MapMan:26.2.1.4	Gene3D:3.30.200.20	EMBL:ACUP02002808
EnsemblPlantsGene:GLYMA_05G036600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1JZZ2	InterPro:IPR000719
EnsemblPlants:KRH57054	ProteinID:KRH57054	ProteinID:KRH57054.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF5	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233956F	:

Description

hypothetical protein

Coordinates

chr5:-:3214335..3221205

Molecular Weight (calculated)

43747.5 Da

IEP (calculated)

7.709

GRAVY (calculated)

-0.383

Length

391 amino acids

Sequence
(BLAST)

001: MKESSDGFVR ADQIDLKSID EQLERHLSKV LTIEKKKRSE GEEDADHVHL HVHTTSATAS PKFSHASSAA RVNFKKKKQD WEIDPSKLII KTVIARGTFG
101: TVHRGVYDTQ DVAVKLLDWG EEGQRTEAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGATM GSSELQIQTD NGLIGMPSNV CCVVVEYLAG GNLKQYLIKN
201: RRRKLAFKVV IQLALDLARG LSYLHSQKIV HRDVKTENML LDKTRTVKIA DFGVARVEAS NPNDMTGETG TLGYMAPEVL NGNPYNRKCD VYSFGICLWE
301: IYCCDMPYPD LSFSEITSAV VRQNLRPEVP RCCPSSLANV MKKCWDASPD KRPEMDEVVS MLEAIDTSKG GGMIPLDQQQ GCFCFRKHRG P

Best Arabidopsis Sequence Match ( AT5G50000.1 )
(BLAST)

001: MKEGKDGFVR ADQIDLKSLD EQLERHLSRA LTLEKNKKKD EEDTTAVAIG GSASSSPVTL NGGGFVGKRK QRLEWEIDPS KLIIKTVLAR GTFGTVHRGI
101: YDGQDVAVKL LDWGEEGHRS EAEIVSLRAD FAQEVAVWHK LDHPNVTKFI GATMGASGLQ LQTESGPLAM PNNICCVVVE YLPGGALKSY LIKNRRRKLT
201: FKIVVQLALD LARGLSYLHS QKIVHRDVKT ENMLLDKTRT VKIADFGVAR VEASNPNDMT GETGTLGYMA PEVLNGNPYN RKCDVYSFGI CLWEIYCCDM
301: PYPDLTFSEV TSAVVRQNLR PDIPRCCPSA LAAVMKRCWD ANPDKRPEMD EVVPMLESID TTKGGGMIPN DQQQGCLCFR RKRGP

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.