CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22750.1	KRG89812	AT5G21274.1	17360592
AT3G22750.1	KRG94975	AT5G21274.1	17360592
AT3G22750.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35488	Soybean	plastid	27.56	86.78
Solyc10g045270.1.1	Tomato	cytosol	46.46	72.24
KRH77828	Soybean	cytosol	72.97	71.83
KRH27659	Soybean	cytosol	72.44	71.69
GSMUA_Achr7P01410_001	Banana	cytosol	64.83	69.97
CDY34236	Canola	cytosol	64.04	69.71
GSMUA_Achr6P24390_001	Banana	cytosol	62.47	67.42
VIT_05s0020g03870.t01	Wine grape	cytosol	67.72	65.98
Bra023811.1-P	Field mustard	cytosol	65.35	65.53
CDY55265	Canola	cytosol	65.35	65.53
AT3G22750.1	Thale cress	cytosol	64.3	64.81
CDY10667	Canola	cytosol	64.3	64.81
CDY10304	Canola	cytosol	64.3	64.81
Bra033921.1-P	Field mustard	cytosol	64.3	64.81
HORVU5Hr1G093370.1	Barley	cytosol	62.73	64.08
KXG23933	Sorghum	cytosol	61.94	63.78
Os03t0638800-01	Rice	plasma membrane	63.25	63.59
PGSC0003DMT400082063	Potato	cytosol	65.88	63.54
TraesCS5B01G380400.1	Wheat	cytosol	62.2	63.54
TraesCS5A01G376700.1	Wheat	cytosol	62.2	63.54
TraesCS5D01G386800.1	Wheat	cytosol	62.2	63.54
Solyc09g082470.2.1	Tomato	cytosol	65.62	63.29
PGSC0003DMT400097225	Potato	cytosol	54.86	63.14
Zm00001d031014_P001	Maize	cytosol, plasma membrane	61.15	62.97
AT4G14780.1	Thale cress	cytosol	60.1	62.91
CDY08298	Canola	cytosol	60.1	62.91
KXG37965	Sorghum	cytosol	62.2	62.7
Zm00001d033275_P007	Maize	plasma membrane	62.2	62.7
CDY06483	Canola	cytosol	59.84	62.64
Bra037067.1-P	Field mustard	cytosol	59.84	62.64
GSMUA_Achr4P21230_001	Banana	cytosol	60.37	61.99
KRH20309	Soybean	cytosol	58.27	60.66
KRG93329	Soybean	cytosol	58.27	60.49
KRH03312	Soybean	nucleus	58.79	57.14
KRH57054	Soybean	nucleus	58.53	57.03
KRH63524	Soybean	cytosol	57.48	56.74
KRH54415	Soybean	cytosol	56.96	56.22

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100807899	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02012677	EnsemblPlantsGene:GLYMA_20G149000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1NGI3	InterPro:IPR000719	EnsemblPlants:KRG91343
ProteinID:KRG91343	ProteinID:KRG91343.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF1	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233E1DB	:	:

Description

hypothetical protein

Coordinates

chr20:-:38756388..38761249

Molecular Weight (calculated)

42790.8 Da

IEP (calculated)

8.412

GRAVY (calculated)

-0.285

Length

381 amino acids

Sequence
(BLAST)

001: MHSEGGVTPK MGLEAVPSNS KMICSENLSS KNMNFRADKI DLMNLDVMLE KHVNRIFSKS IEAKRHKESW EIDLTKLDLQ YCVANGAYGT VYRGTYDNQD
101: VAVKVLDWGE DGVATAVEIA ALRASFWQEV TVWQKLDHPN VTKFIGASMG TSNLKIPLPS CGQNSVPSKA CCVIAEFLPG GTLKQYLFKN RQNKLPYKVV
201: IQLALDLSRS LSYLHSKKIV HRDVKTDNML LDAKQNLKIA DFGVARVEAI NQSEMTGETG TYGYMAPEVL NGKPYNRKCD VYSFGICLWE IYYCNRPYSK
301: LSLAAVSRAV INQHLRPEIP RSCPSALSNI MRKCWDAKPE KRPEMHEVVE MLEAIDTSKG GEIICKDKNP FCLCFVPSCR P

Best Arabidopsis Sequence Match ( AT3G01490.1 )
(BLAST)

001: MKEKAESGGG VGYVRADQID LKSLDEQLQR HLSKAWTMEK RKSLSDGEDN VNNTRHNQNN FGHRQLVFQR PLLGGGYSNN NNSSKNDIIR STEVEKSRRE
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P

Arabidopsis Description

AT3g01490/F4P13_4 [Source:UniProtKB/TrEMBL;Acc:Q9SSA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.