Factsheet for GSMUA_Achr6P24390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22750.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT3G22750.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01410_001	Banana	cytosol	78.75	78.75
GSMUA_Achr2P14480_001	Banana	cytosol	34.28	78.06
GSMUA_Achr2P14410_001	Banana	cytosol	33.99	77.92
Solyc10g045270.1.1	Tomato	cytosol	53.82	77.55
CDY34236	Canola	cytosol	76.49	77.14
KRH77828	Soybean	cytosol	78.47	71.58
KRH27659	Soybean	cytosol	77.9	71.43
GSMUA_Achr4P21230_001	Banana	cytosol	75.07	71.43
Bra023811.1-P	Field mustard	cytosol	76.49	71.05
CDY55265	Canola	cytosol	76.49	71.05
AT3G22750.1	Thale cress	cytosol	75.35	70.37
VIT_05s0020g03870.t01	Wine grape	cytosol	77.9	70.33
CDY10304	Canola	cytosol	75.07	70.11
CDY10667	Canola	cytosol	75.07	70.11
Bra033921.1-P	Field mustard	cytosol	75.07	70.11
AT4G14780.1	Thale cress	cytosol	72.24	70.05
CDY08298	Canola	cytosol	71.95	69.78
CDY06483	Canola	cytosol	71.67	69.51
Bra037067.1-P	Field mustard	cytosol	71.67	69.51
VIT_07s0151g00500.t01	Wine grape	cytosol	77.05	67.33
PGSC0003DMT400082063	Potato	cytosol	74.79	66.84
Solyc09g082470.2.1	Tomato	cytosol	74.79	66.84
PGSC0003DMT400097225	Potato	cytosol	62.32	66.47
KRH35488	Soybean	plastid	22.38	65.29
Bra040440.1-P	Field mustard	cytosol	67.42	63.81
CDY53719	Canola	cytosol	67.42	63.64
CDY56447	Canola	cytosol	69.41	63.31
Bra007738.1-P	Field mustard	cytosol	69.41	63.31
GSMUA_Achr4P24420_001	Banana	cytosol	70.25	63.27
CDX93916	Canola	cytosol	67.42	62.8
KRG91343	Soybean	cytosol	67.42	62.47
AT3G63260.1	Thale cress	cytosol	69.12	62.4
CDX76692	Canola	cytosol	69.41	34.03
GSMUA_Achr2P14470_001	Banana	cytosol	5.67	14.08
GSMUA_Achr2P14400_001	Banana	nucleus	6.52	10.41
CDX93917	Canola	cytosol	1.42	1.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G24390_001
EnsemblPlants:GSMUA_Achr6P24390_001	EnsemblPlants:GSMUA_Achr6T24390_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T9T5	PFAM:PF07714
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF6
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294C4F0

Description

Putative Serine/threonine-protein kinase HT1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G24390_001]

Coordinates

chr6:-:25081952..25087569

Molecular Weight (calculated)

39911.2 Da

IEP (calculated)

8.400

GRAVY (calculated)

-0.284

Length

353 amino acids

Sequence
(BLAST)

001: MFVRADKIDL RSLDIQLEKT LSKIWLKERR GSQKPSEEWE IDLSKLEIRY VIARGTYGTV YRGVYDGQDV AVKLLDWGQD GVTIDAETAA LRASFQQEVA
101: VWHRLDHPNV TKFVGASMWT SNLKIPQNDS TSNCHSSLPT RACCVVVEYL AGGTLKQYLI KNRRRKLPYK IVIQVALDLA RGLSYLHSKK IVHRDVKTEN
201: MLLDTNRKLK IADFGVARVE AQNPRDMTGE TGTLGYMAPE VLDGKPYNRR CDVYSFGICL WEIYCCDMPY ADLSFVDVSS AVVRQNLRPE IPRCCPSSLA
301: NIMRKCWDAN PDKRLEMYEV VKLLEAIDTS KGGGMVPEDR AAGCLCFSLA RGP

Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)

001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP

Arabidopsis Description

Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.