CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56447	Canola	cytosol	51.94	96.64
CDY53719	Canola	cytosol	47.08	90.64
CDX93916	Canola	cytosol	47.36	89.97
CDX93917	Canola	cytosol	40.56	87.69
AT3G63260.1	Thale cress	cytosol	47.22	86.96
GSMUA_Achr6P24390_001	Banana	cytosol	34.03	69.41
GSMUA_Achr7P01410_001	Banana	cytosol	33.19	67.71
CDY34236	Canola	cytosol	32.78	67.43
HORVU5Hr1G093370.1	Barley	cytosol	34.58	66.76
TraesCS5D01G386800.1	Wheat	cytosol	34.44	66.49
TraesCS5B01G380400.1	Wheat	cytosol	34.44	66.49
TraesCS5A01G376700.1	Wheat	cytosol	34.44	66.49
Os03t0638800-01	Rice	plasma membrane	34.72	65.96
Zm00001d033275_P007	Maize	plasma membrane	34.44	65.61
KXG37965	Sorghum	cytosol	34.44	65.61
KXG23933	Sorghum	cytosol	33.61	65.41
Zm00001d031014_P001	Maize	cytosol, plasma membrane	33.06	64.32
GSMUA_Achr4P21230_001	Banana	cytosol	33.06	64.15
CDY55265	Canola	cytosol	33.47	63.42
CDY10667	Canola	cytosol	33.06	62.96
CDY10304	Canola	cytosol	33.06	62.96
VIT_07s0151g00500.t01	Wine grape	cytosol	35.28	62.87
CDY06483	Canola	cytosol	31.53	62.36
CDY08298	Canola	cytosol	31.25	61.81
CDY49058	Canola	nucleus	32.92	61.4
CDY37517	Canola	cytosol	32.78	61.14
CDY68821	Canola	cytosol	31.53	59.11
CDY21438	Canola	cytosol	31.53	58.81
CDX99149	Canola	cytosol, plasma membrane, plastid	5.28	44.71
CDY65655	Canola	cytosol	7.08	30.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.20.20.330	Gene3D:3.30.200.20	MapMan:4.1.2.2.6.3.1	GO:A0A078CIV8
EnsemblPlants:CDX76692	ProteinID:CDX76692	ProteinID:CDX76692.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00127172001
InterPro:HCY_dom	InterPro:HCY_dom_sf	InterPro:IPR000719	InterPro:IPR003726	InterPro:IPR036589	InterPro:Kinase-like_dom_sf
PFAM:PF02574	PFAM:PF07714	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50970	PANTHER:PTHR44084	PANTHER:PTHR44084:SF1	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
SUPFAM:SSF82282	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE5DCD	SEG:seg	:

Description

BnaC08g32780D

Coordinates

chrLK031808:-:565445..570784

Molecular Weight (calculated)

78224.8 Da

IEP (calculated)

6.033

GRAVY (calculated)

-0.238

Length

720 amino acids

Sequence
(BLAST)

001: MASGGGEAAR SVEIGSDRKL GGVGSRSAGG GQYFRADTLD FSKWDLHMGQ TSSSSSTTAK SSTSTKAPMH EWEIDLSKLD MKHVLAHGTY GTVYRGVYAG
101: QQVAVKVLDW GEDGQSTAAE TTALRSSFEQ EVAVWQKLDH PNVTKFIGAS MGTSDLKIPP ANDSGGRGGS GAHPARACCV VVEYVAGGTL KKFLIKKYRS
201: KLPIKDVIQL ALDLARGLSY LHSKAIVHRD VKTENMLLET NKTLKIADFG VARVEAQNPQ DMTGETGTLG YMAPEVLEGK PYNRKCDVYS FGVCLWEIYC
301: CDMPYADCSF AEISHAVVHK NLRPEIPNCC PQSVANIMKR CWDPNPDKRP EMEEVVKLLE AVNTSKGGGM IPPDKFQGSS KSEAFNSMKE FLKQTGGYAI
401: IDGGLATEFE RHGADLNDPL WSSKCLLTSP HIIHTVCLDY LEAGADIIAS ASYQATIQGF ETKGFSREKS EYLLRKSVEI ACEARSTYYD KCKATSSSSD
501: IVDDKILKTR PILVAASVGS YGAYLADGSE YSGIYGDLIT LETLKDFHRR KLQVLGESGA DIIAFETIPS KLEAQAFAEL LDEGDVKISG WFSFNSNDGV
601: NVVSGDSIKE CVAIAEACET VVAVGINCTS PRFIEGLVLE IAKVTSKPIL AYPNSGERYD ADRKEWVEKA GVGDEDFVSY VEKWMDAGVS LLGGCCRTTP
701: ATIRAIHKRL VTRRSLFSSS

Best Arabidopsis Sequence Match ( AT3G63260.1 )
(BLAST)

001: MASGGGEADK SLEIGSGTAD PKIGGTGSRS AGEERYFRAD TLDFSKWDLH MGQTSTSSVL TNSASTSAPA PAMQEWEIDL SKLDMKHVLA HGTYGTVYRG
101: VYAGQEVAVK VLDWGEDGYA TPAETTALRA SFEQEVAVWQ KLDHPNVTKF IGASMGTSDL RIPPAGDTGG RGNGAHPARA CCVVVEYVAG GTLKKFLIKK
201: YRAKLPIKDV IQLALDLARG LSYLHSKAIV HRDVKSENML LQPNKTLKIA DFGVARVEAQ NPQDMTGETG TLGYMAPEVL EGKPYNRKCD VYSFGVCLWE
301: IYCCDMPYAD CSFAEISHAV VHRNLRPEIP KCCPHAVANI MKRCWDPNPD RRPEMEEVVK LLEAIDTSKG GGMIAPDQFQ GCLCFFKPRG P

Arabidopsis Description

ATMRK1ATMRK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.