CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027847.1-P	Field mustard	cytosol	100.0	100.0
CDX99149	Canola	cytosol, plasma membrane, plastid	13.69	27.06
Solyc12g016020.1.1	Tomato	cytosol	7.74	23.21
Solyc12g016040.1.1	Tomato	extracellular, plasma membrane	6.55	14.67
CDY34236	Canola	cytosol	30.36	14.57
CDY68821	Canola	cytosol	31.55	13.8
CDY10304	Canola	cytosol	30.95	13.76
CDY10667	Canola	cytosol	30.95	13.76
CDY06483	Canola	cytosol	29.76	13.74
CDY08298	Canola	cytosol	29.76	13.74
CDY21438	Canola	cytosol	31.55	13.73
CDY49058	Canola	nucleus	31.55	13.73
CDY37517	Canola	cytosol	31.55	13.73
CDY55265	Canola	cytosol	30.36	13.42
CDY56447	Canola	cytosol	29.76	12.92
CDY53719	Canola	cytosol	28.57	12.83
CDX93916	Canola	cytosol	27.98	12.4
CDX76692	Canola	cytosol	30.36	7.08
CDX93917	Canola	cytosol	1.19	0.6

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:50.2.7	GO:A0A078JGL7	UniProt:A0A078JGL7	EnsemblPlants:CDY65655	ProteinID:CDY65655	ProteinID:CDY65655.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004713
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00047938001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF619
InterPro:Prot_kinase_dom	SMART:SM00219	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_HT1_plant	InterPro:Tyr_kinase_cat_dom
UniParc:UPI00025427B8	SEG:seg	:	:	:	:

Description

BnaAnng20900DBnaAnng20900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGL7]

Coordinates

chrLK034878:-:22126..22957

Molecular Weight (calculated)

18750.7 Da

IEP (calculated)

8.593

GRAVY (calculated)

-0.263

Length

168 amino acids

Sequence
(BLAST)

001: MRVKVADFGT SCLETQCREA KGNMGTYRWM ALEMIKDKPY TRKVDVYSFG IVLWELTTAL LPFQGMTPVQ AAFAVAEKNE RPPLPASCQP ELDHLIKRCW
101: SENPSKRPDF SNIVAVLEKY DECVKEGLPL TSHANLTKTK HAILDRLKGC VSAISSKSSS SSVPVNAW

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.