Factsheet for Solyc12g016040.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 4
extracellular 4
golgi 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g016020.1.1	Tomato	cytosol	60.0	80.36
Solyc04g026210.2.1	Tomato	cytosol	20.0	10.79
Solyc10g045270.1.1	Tomato	cytosol	25.33	7.76
Solyc12g062280.1.1	Tomato	cytosol	34.67	7.18
Solyc03g121780.1.1	Tomato	cytosol	28.0	6.75
Solyc06g071410.2.1	Tomato	cytosol	34.67	6.6
Bra027847.1-P	Field mustard	cytosol	14.67	6.55
CDY65655	Canola	cytosol	14.67	6.55
Solyc03g114210.2.1	Tomato	endoplasmic reticulum	33.33	6.39
Solyc09g082470.2.1	Tomato	cytosol	33.33	6.33
Solyc04g026230.1.1	Tomato	cytosol	2.67	1.64
Solyc10g045280.1.1	Tomato	cytosol	1.33	0.83

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4DD38
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF601
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g016040.1	EnsemblPlants:Solyc12g016040.1.1	UniParc:UPI000276AB00
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:-:6089195..6089586

Molecular Weight (calculated)

8455.6 Da

IEP (calculated)

9.719

GRAVY (calculated)

0.208

Length

75 amino acids

Sequence
(BLAST)

1: MSVQNQAVPL KLAVKLVLYV EHVHDLNLIH RDLKSDNLLI AADKLIKIAD FGVARIKVLT KGMTPDTCTY RWMAP

Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)

001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D

Arabidopsis Description

STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.