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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P14470_001 Banana cytosol 44.63 38.03
GSMUA_Achr2P14400_001 Banana nucleus 48.76 26.7
Solyc04g026230.1.1 Tomato cytosol 4.96 4.92
Solyc12g062280.1.1 Tomato cytosol 9.09 3.04
Solyc03g114210.2.1 Tomato endoplasmic reticulum 9.09 2.81
Solyc06g071410.2.1 Tomato cytosol 9.09 2.79
Solyc09g082470.2.1 Tomato cytosol 8.26 2.53
Solyc03g121780.1.1 Tomato cytosol 4.96 1.93
Solyc10g045270.1.1 Tomato cytosol 3.31 1.63
Solyc12g016040.1.1 Tomato extracellular, plasma membrane 0.83 1.33
GSMUA_Achr2P14480_001 Banana cytosol 0.0 0.0
HORVU5Hr1G119710.1 Barley plasma membrane 0.0 0.0
Solyc04g026210.2.1 Tomato cytosol 0.0 0.0
Solyc12g016020.1.1 Tomato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc10g045280.1.1EnsemblPlantsGene:Solyc10g045280.1Gene3D:3.30.200.20PANTHER:PTHR44084PANTHER:PTHR44084:SF6UniParc:UPI000276B3F1
UniProt:K4CZP6MapMan:35.2::::
Description
No Description!
Coordinates
chr10:-:32600922..32601287
Molecular Weight (calculated)
14089.7 Da
IEP (calculated)
7.055
GRAVY (calculated)
-0.596
Length
121 amino acids
Sequence
(BLAST)
001: MSKLKGLANV DERNDMIFRA DKIDLKSLDV QLEKHLSRVW SSNVENQNQR PREGWEIDPS KLEIRYLVAQ GTYGTVHRGT YDNQDVAGNP QIHCFMVDNC
101: NIIVEKLQSI FLHVYSHKLY N
Best Arabidopsis Sequence Match ( AT3G22750.1 )
(BLAST)
001: METRNETKAS PENNLRNRGA DGNNSKKDMI FRADKIDLKN LDIQLEKHLS RVWSRSIEKH PKPKEEWEIE LAKLEMRNVI ARGAYGIVYK GIYDGQDVAV
101: KVLDWGEDGY ATTAETSALR ASFRQEVAVW HKLDHPNVTR FVGASMGTAN LKIPSSAETE NSLPQRACCV VVEYIPGGTL KQYLFRNRRK KLAFKVVVQL
201: ALDLSRGLSY LHSERIVHRD VKTENMLLDY QRNLKIADFG VARVEAQNPK DMTGETGTLG YMAPEVLDGK PYNRRCDVYS FGICLWEIYC CDMPYPDLSF
301: ADVSSAVVRQ NLRPDIPRCC PTALATIMKR CWEANPEKRP EMEEVVSLLE AVDTTKGGGM IPEDQRPGCF CFVSGRGP
Arabidopsis Description
Kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LUI6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.