Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G387200.1 | Wheat | cytosol | 94.19 | 94.19 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 65.16 | 60.48 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 58.71 | 55.83 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 56.77 | 55.35 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 59.35 | 54.76 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 63.87 | 54.4 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 58.06 | 50.0 |
| TraesCS7D01G313100.1 | Wheat | cytosol | 36.13 | 37.84 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 33.55 | 34.67 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 53.55 | 34.44 |
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 36.77 | 33.93 |
| TraesCS1D01G197600.1 | Wheat | cytosol | 35.48 | 28.35 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 37.42 | 22.75 |
| TraesCS5A01G382700.1 | Wheat | nucleus | 0.65 | 0.73 |
| TraesCS5B01G387100.1 | Wheat | mitochondrion, nucleus | 0.65 | 0.73 |
| TraesCS5D01G392100.1 | Wheat | mitochondrion, nucleus | 0.65 | 0.73 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G392200.1 | EnsemblPlantsGene:TraesCS5D01G392200 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF198 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:460648061..460649675
Molecular Weight (calculated)
17475.5 Da
IEP (calculated)
3.809
GRAVY (calculated)
-0.496
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQALTGEQM VAFQEAFSLF DKNGDGCISL EELAAVTRSL GLDPTNQELN DMMREVDMDG NGTIDFQEFL SLIARKMQDG DADEELKEAF EVLDKDRNGF
101: ISPVELRTVM INLGEKMTDE EVEQMIREAD TDGDGQVNYD EFVLMMKNAE RKITG
101: ISPVELRTVM INLGEKMTDE EVEQMIREAD TDGDGQVNYD EFVLMMKNAE RKITG
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.