Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G392200.1 | Wheat | cytosol | 94.19 | 94.19 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 65.16 | 57.71 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 64.52 | 57.47 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 58.06 | 53.57 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 63.23 | 53.55 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 58.06 | 50.0 |
| TraesCS7B01G217200.1 | Wheat | cytosol, plastid | 36.77 | 38.51 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 52.9 | 35.5 |
| TraesCS2B01G192400.1 | Wheat | cytosol, mitochondrion | 37.42 | 34.52 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 32.9 | 34.0 |
| TraesCS7B01G412100.1 | Wheat | cytosol | 38.71 | 33.15 |
| TraesCS1B01G446400.1 | Wheat | plastid | 36.13 | 32.0 |
| TraesCS1B01G208700.1 | Wheat | cytosol | 35.48 | 28.8 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 37.42 | 22.75 |
| TraesCS5A01G382700.1 | Wheat | nucleus | 0.65 | 0.73 |
| TraesCS5B01G387100.1 | Wheat | mitochondrion, nucleus | 0.65 | 0.73 |
| TraesCS5D01G392100.1 | Wheat | mitochondrion, nucleus | 0.65 | 0.73 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G387200.1 | EnsemblPlantsGene:TraesCS5B01G387200 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF198 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:566502246..566503906
Molecular Weight (calculated)
17379.5 Da
IEP (calculated)
3.793
GRAVY (calculated)
-0.445
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGLTGEQM AAFQEAFSLF DKNGDGCISL EELAAVTRSL GLDPTNQELN DMMCEVDMDG NGTIDFQEFL SLIVRKMKDG DGDEELKEAF EVLDKDRNGF
101: ISPVELRTVM INLGEKMTDE EVEQMIKEAD TDGDGQVNYD EFVLMMKNAE RKIIG
101: ISPVELRTVM INLGEKMTDE EVEQMIKEAD TDGDGQVNYD EFVLMMKNAE RKIIG
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.