Factsheet for HORVU5Hr1G059930.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G029080.1
HORVU1Hr1G071780.21
HORVU2Hr1G025040.2
HORVU3Hr1G087140.16
HORVU4Hr1G072260.1
HORVU4Hr1G089360.1
HORVU5Hr1G078450.1
HORVU5Hr1G105430.16
HORVU6Hr1G029150.7
HORVU6Hr1G083540.21

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19560.1	HORVU1Hr1G029080.1	AT2G39340.1	19843313
AT2G19560.1	HORVU1Hr1G071780.21	AT2G39340.1	19843313
AT2G19560.1	HORVU3Hr1G087140.16	AT2G39340.1	19843313
AT2G19560.1	HORVU2Hr1G025040.2	AT3G06290.1	19843313
AT2G19560.1	HORVU5Hr1G105430.16	AT5G16310.1	19843313
AT2G19560.1	HORVU6Hr1G029150.7	AT5G16310.1	19843313
AT2G19560.1	HORVU6Hr1G083540.21	AT5G16310.1	19843313
AT2G19560.1	HORVU4Hr1G072260.1	AT5G61290.1	19843313
AT2G19560.1	HORVU4Hr1G089360.1	AT5G61290.1	19843313
AT2G19560.1	HORVU5Hr1G078450.1	AT5G61290.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G200200.1	Wheat	cytosol	98.53	98.53
TraesCS5D01G207800.1	Wheat	cytosol	98.29	98.29
TraesCS5A01G201500.1	Wheat	cytosol	98.04	98.04
Os09t0386400-01	Rice	cytosol	88.75	88.75
EER98853	Sorghum	cytosol	88.75	88.75
Zm00001d020359_P003	Maize	cytosol	87.29	83.41
GSMUA_Achr7P18480_001	Banana	cytosol	71.15	70.46
VIT_11s0016g02290.t01	Wine grape	cytosol	69.19	68.52
KRH02720	Soybean	cytosol, nucleus	69.19	68.52
KRH19149	Soybean	cytosol, nucleus	67.97	67.8
CDY66989	Canola	cytosol	58.92	66.94
PGSC0003DMT400056705	Potato	cytosol	29.1	66.85
CDY67021	Canola	cytosol	58.68	66.85
PGSC0003DMT400034206	Potato	cytosol	66.26	65.3
Solyc07g039210.2.1	Tomato	nucleus	66.26	65.3
CDY35873	Canola	cytosol	65.77	65.13
Bra040682.1-P	Field mustard	cytosol	65.53	64.89
AT2G19560.1	Thale cress	cytosol	63.81	63.2
CDY13554	Canola	cytosol	24.94	58.96
CDY13555	Canola	cytosol, nucleus, vacuole	15.16	32.29

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.25.40.570	MapMan:16.11.2.2	EMBL:AK354508	EMBL:AK375735	UniProt:F2CSA6
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009723
GO:GO:0009873	GO:GO:0009987	GO:GO:0016973	GO:GO:0048364	GO:GO:0060968	EnsemblPlantsGene:HORVU5Hr1G059930
EnsemblPlants:HORVU5Hr1G059930.4	InterPro:IPR000717	InterPro:IPR036388	InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250
PANTHER:PTHR12732	PANTHER:PTHR12732:SF0	UniParc:UPI00020046C7	InterPro:WH-like_DNA-bd_sf	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CSA6]

Coordinates

chrchr5H:+:468282605..468287375

Molecular Weight (calculated)

46559.2 Da

IEP (calculated)

9.688

GRAVY (calculated)

-0.005

Length

409 amino acids

Sequence
(BLAST)

001: MAAYLSMGEA HRRISDYLSR LDVAISQSDG ADLASLLAIS SAPASTPLSD ALAAFPDFAR LAADRFPHLS DFLPLLLRAI HSHSLRRFGD AYSSFEKAAS
101: AFLQEFRNWE TPWAMEAMHI VALEIRLLAE KADRELVMSG KNPDKLQAAG SFLMKVFGAL AVKGPKRVGA LYVTCQLFKI YFRLGTVNLC RSVIRSIETA
201: RNFDFEDFPV KDKVTYMYYT GRLEVFNENF LVADQKLTYA LMHCNPQSES NLRKILKFLI PVKLSIGVLP RRSLLEKYNL LEYADIVTSL RRGDLRLLKQ
301: ALDRHEDQLL KCGVYLVLEK LELQVYRRLV KKIHIIQREK EPSKAHQIKL EVLVKTLQWL GITMDVDEVE CIMACLIYKN LIKGYFAHKS KVLVLSKQDP
401: FPKLNGKPV

Best Arabidopsis Sequence Match ( AT2G19560.1 )
(BLAST)

001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS

Arabidopsis Description

EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.